RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 HJURPQ8NCD3 748 aaPredicted RBP19.38■□□□□ 0.69
SPIDR-220ENST00000522900 FIBINQ8TAL6 211 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 GBP4Q96PP9 640 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 DDX50Q9BQ39 737 aaKnown RBP19.38■□□□□ 0.69
SPIDR-220ENST00000522900 IRX2Q9BZI1 471 aaPredicted RBP19.38■□□□□ 0.69
SPIDR-220ENST00000522900 VPS16Q9H269 839 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 FSCN3Q9NQT6 498 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 INTS6Q9UL03 887 aaKnown RBP19.38■□□□□ 0.69
SPIDR-220ENST00000522900 PLA2G4CQ9UP65 541 aa19.38■□□□□ 0.69
SPIDR-220ENST00000522900 SYNJ2BP-COX16A0A087WUM0 186 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 UCHL3P15374 230 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 KCNA4P22459 653 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 EEF1GP26641 437 aaKnown RBP19.37■□□□□ 0.69
SPIDR-220ENST00000522900 KLK7P49862 253 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 LMAN2Q12907 356 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 FNDC3BQ53EP0 1204 aaKnown RBP19.37■□□□□ 0.69
SPIDR-220ENST00000522900 EFHC1Q5JVL4 640 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 CDKAL1Q5VV42 579 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 SMYD5Q6GMV2 418 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 OLFML1Q6UWY5 402 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 C11orf57Q6ZUT1 292 aaPredicted RBP19.37■□□□□ 0.69
SPIDR-220ENST00000522900 METTL3Q86U44 580 aaKnown RBP19.37■□□□□ 0.69
SPIDR-220ENST00000522900 CACUL1Q86Y37 369 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 SIPA1Q96FS4 1042 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 HSPA12BQ96MM6 686 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 FANCLQ9NW38 375 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 WSB2Q9NYS7 404 aaPredicted RBP19.37■□□□□ 0.69
SPIDR-220ENST00000522900 COX16Q9P0S2 106 aa19.37■□□□□ 0.69
SPIDR-220ENST00000522900 USP36Q9P275 1121 aaKnown RBP19.37■□□□□ 0.69
SPIDR-220ENST00000522900 KCNU1A8MYU2 1149 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 APOEP02649 317 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 GLI1P08151 1106 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 DLDP09622 509 aaKnown RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 CYP11B1P15538 503 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 POLR2EP19388 210 aaKnown RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 TACR2P21452 398 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 CD6P30203 668 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 TPMTP51580 245 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 BPIFB4P59827 614 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 CDK17Q00537 523 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 CAMK2GQ13555 558 aaPredicted RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 KRT31Q15323 416 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 E2F5Q15329 346 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 TAF3Q5VWG9 929 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 PEAR1Q5VY43 1037 aaPredicted RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 DDX1Q92499 740 aaKnown RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 PRCCQ92733 491 aaPredicted RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 TOE1Q96GM8 510 aaKnown RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 ZNF419Q96HQ0 510 aaPredicted RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 BTN2A3PQ96KV6 586 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 NOX5Q96PH1 765 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 MTG2Q9H4K7 406 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 FAM204AQ9H8W3 233 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 ASNSD1Q9NWL6 643 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 DDIT4Q9NX09 232 aa19.36■□□□□ 0.69
SPIDR-220ENST00000522900 EVLQ9UI08 416 aaPredicted RBP19.36■□□□□ 0.69
SPIDR-220ENST00000522900 HSF2BPO75031 334 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 NDUFS2O75306 463 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 ATP5BP06576 529 aaKnown RBP19.35■□□□□ 0.69
SPIDR-220ENST00000522900 MAOBP27338 520 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 SLC6A3Q01959 620 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 SLC23A3Q6PIS1 610 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 NOP9Q86U38 636 aaKnown RBP19.35■□□□□ 0.69
SPIDR-220ENST00000522900 CHSY1Q86X52 802 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 OR2T3Q8NH03 318 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 TTC17Q96AE7 1141 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 MYO19Q96H55 970 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 PRMT1Q99873 361 aaKnown RBP19.35■□□□□ 0.69
SPIDR-220ENST00000522900 ADAM33Q9BZ11 813 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 PRSS16Q9NQE7 514 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 PLXND1Q9Y4D7 1925 aa19.35■□□□□ 0.69
SPIDR-220ENST00000522900 LUC7L3O95232 432 aaKnown RBP19.34■□□□□ 0.69
SPIDR-220ENST00000522900 CFIP05156 583 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 ENGP17813 658 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 CSKP41240 450 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 CTSOP43234 321 aaPredicted RBP19.34■□□□□ 0.69
SPIDR-220ENST00000522900 NME3Q13232 169 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 SLC26A9Q7LBE3 791 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 CIR1Q86X95 450 aaPredicted RBP19.34■□□□□ 0.69
SPIDR-220ENST00000522900 ATP6V0D2Q8N8Y2 350 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 TMEM35BQ8NCS4 154 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 GPR174Q9BXC1 333 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 NUSAP1Q9BXS6 441 aaKnown RBP19.34■□□□□ 0.69
SPIDR-220ENST00000522900 STK33Q9BYT3 514 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 GANQ9H2C0 597 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 PDCL3Q9H2J4 239 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 SYNCQ9H7C4 482 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 NUP205Q92621 2012 aa19.34■□□□□ 0.69
SPIDR-220ENST00000522900 TYW5A2RUC4 315 aaKnown RBP19.33■□□□□ 0.68
SPIDR-220ENST00000522900 F8VZ95 297 aa19.33■□□□□ 0.68
SPIDR-220ENST00000522900 H0Y626 953 aa19.33■□□□□ 0.68
SPIDR-220ENST00000522900 EPHB6O15197 1021 aa19.33■□□□□ 0.68
SPIDR-220ENST00000522900 DAB1O75553 588 aa19.33■□□□□ 0.68
SPIDR-220ENST00000522900 MMEP08473 750 aa19.33■□□□□ 0.68
SPIDR-220ENST00000522900 ADRB1P08588 477 aa19.33■□□□□ 0.68
SPIDR-220ENST00000522900 TFE3P19532 575 aaPredicted RBP19.33■□□□□ 0.68
SPIDR-220ENST00000522900 CDH5P33151 784 aaPredicted RBP19.33■□□□□ 0.68
SPIDR-220ENST00000522900 MAPK8P45983 427 aa19.33■□□□□ 0.68
SPIDR-220ENST00000522900 NUMBP49757 651 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms