RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ST3GAL1Q11201 340 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 E2F5Q15329 346 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 DHCR24Q15392 516 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 ZC2HC1CQ53FD0 456 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-220ENST00000522658 FBLN7Q53RD9 439 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 MDH1BQ5I0G3 518 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 L1TD1Q5T7N2 865 aaKnown RBP6.61□□□□□ -1.35
PABPC1-220ENST00000522658 GRAMD4Q6IC98 578 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 SLC39A4Q6P5W5 647 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 KIAA1324Q6UXG2 1013 aaKnown RBP6.61□□□□□ -1.35
PABPC1-220ENST00000522658 CHPFQ8IZ52 775 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 KIAA1958Q8N8K9 716 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 IL17RCQ8NAC3 791 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 RIN3Q8TB24 985 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 KCNN1Q92952 543 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 FBXO32Q969P5 355 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 OTUB2Q96DC9 234 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 SPATA17Q96L03 361 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 SLC22A12Q96S37 553 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 PPP4R2Q9NY27 417 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 CYP8B1Q9UNU6 501 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 FAM208BQ5VWN6 2430 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 THADAQ6YHU6 1953 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 A0A1W2PQD8 194 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 E2F8A0AVK6 867 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 GOLGA8IPA6NC78 632 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 GOLGA8JA6NMD2 632 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 UPK3BL1B0FP48 263 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 TISP43B9A030 160 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 UPK3BL2E5RIL1 263 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 F8VP50 259 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 K7EQS6 105 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SGK1O00141 431 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 CER1O95813 267 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 PDGFRBP09619 1106 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 FTH1P19P0C7X4 201 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 ACADMP11310 421 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 TNNI1P19237 187 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 ITIH2P19823 946 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 YWHAQP27348 245 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 NTSR1P30989 418 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SLC7A9P82251 487 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SCAPQ12770 1279 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SLC14A1Q13336 389 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 TRPC3Q13507 836 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 TRIP6Q15654 476 aaKnown RBP6.6□□□□□ -1.35
PABPC1-220ENST00000522658 IL17AQ16552 155 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 NKPD1Q17RQ9 610 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 INAVAQ3KP66 663 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 ARSHQ5FYA8 562 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 HECTD3Q5T447 861 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 RRAGBQ5VZM2 374 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 C19orf48Q6RUI8 117 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 NXPE4Q6UWF7 544 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SV2BQ7L1I2 683 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 DPH6Q7L8W6 267 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 BRAPQ7Z569 592 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 UBE3DQ7Z6J8 389 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 PROSER1Q86XN7 944 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 CILP2Q8IUL8 1156 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 NAXDQ8IW45 347 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 GPD1LQ8N335 351 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 CHCHD4Q8N4Q1 142 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 DEFB119Q8N690 84 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 NAT16Q8N8M0 369 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 TERB1Q8NA31 727 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 OR6B3Q8NGW1 331 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SETD7Q8WTS6 366 aaKnown RBP6.6□□□□□ -1.35
PABPC1-220ENST00000522658 OVCA2Q8WZ82 227 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SNX19Q92543 992 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 HPDLQ96IR7 371 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 KIF2CQ99661 725 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 ZDHHC5Q9C0B5 715 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 DNAI2Q9GZS0 605 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 MIR1-1HGQ9H1L0 117 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 LINC00597Q9H2U6 94 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 ST6GALNAC4Q9H4F1 302 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 UPF2Q9HAU5 1272 aaKnown RBP6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SSU72Q9NP77 194 aaKnown RBP6.6□□□□□ -1.35
PABPC1-220ENST00000522658 FSCN3Q9NQT6 498 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 PRDM7Q9NQW5 492 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 DNAJC17Q9NVM6 304 aaKnown RBP6.6□□□□□ -1.35
PABPC1-220ENST00000522658 GDAP2Q9NXN4 497 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 TBC1D7Q9P0N9 293 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 GCNT4Q9P109 453 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 CALCOCO1Q9P1Z2 691 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 PILRBQ9UKJ0 227 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SMC3Q9UQE7 1217 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-220ENST00000522658 EML5Q05BV3 1969 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 OBSL1O75147 1896 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 SDK1Q7Z5N4 2213 aa6.6□□□□□ -1.35
PABPC1-220ENST00000522658 CNOT1A5YKK6 2376 aaKnown RBP6.59□□□□□ -1.35
PABPC1-220ENST00000522658 NUP205Q92621 2012 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 HELZP42694 1942 aaKnown RBP6.59□□□□□ -1.35
PABPC1-220ENST00000522658 VPS37CA5D8V6 355 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-220ENST00000522658 ZNF503-AS2A6NEH8 195 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 ZNF233A6NK53 670 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 A8MXQ7 604 aa6.59□□□□□ -1.35
PABPC1-220ENST00000522658 NEDD8-MDP1E9PL57 170 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms