RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CCDC17Q96LX7 622 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 LENG8Q96PV6 779 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-209ENST00000521559 FAM118BQ9BPY3 351 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 C22orf23Q9BZE7 217 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 DHX36Q9H2U1 1008 aaKnown RBP3.77□□□□□ -1.81
VPS13B-209ENST00000521559 SNX15Q9NRS6 342 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 AFF4Q9UHB7 1163 aaKnown RBP3.77□□□□□ -1.81
VPS13B-209ENST00000521559 OGDHLQ9ULD0 1010 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 MAFFQ9ULX9 164 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 DRG1Q9Y295 367 aaKnown RBP3.77□□□□□ -1.81
VPS13B-209ENST00000521559 BTBD3Q9Y2F9 522 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 TBC1D30Q9Y2I9 924 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 ATP6V0A2Q9Y487 856 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 UBR3Q6ZT12 1888 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 TAF1LQ8IZX4 1826 aa3.77□□□□□ -1.81
VPS13B-209ENST00000521559 CASZ1Q86V15 1759 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 CYP2D7A0A087X1C5 515 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 AQP7P3A6NL99 342 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 TMEM232C9JQI7 657 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 EYA2O00167 538 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 PRPF3O43395 683 aaKnown RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 MGEA5O60502 916 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 HMMRO75330 724 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 PMPCBO75439 489 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 GCATO75600 419 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 CIAO1O76071 339 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 FGAP02671 866 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 NHLRC4P0CG21 123 aaPredicted RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 MYBP10242 640 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 RPL17P18621 184 aaKnown RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 IGHMBP2P38935 993 aaKnown RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 RENBPP51606 427 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 KRTAP10-11P60412 298 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 ARHGEF7Q14155 803 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 SLC29A2Q14542 456 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 POLD3Q15054 466 aaPredicted RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 TRIP6Q15654 476 aaKnown RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 GPR162Q16538 588 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 CYP1B1Q16678 543 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 FAM187BQ17R55 369 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 LY6KQ17RY6 165 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 FCRL6Q6DN72 434 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 C11orf87Q6NUJ2 197 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 LDHAL6AQ6ZMR3 332 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 PTCHD4Q6ZW05 846 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 YAF2Q8IY57 180 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 PRSS3P2Q8NHM4 247 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 EXOC6Q8TAG9 804 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 DNAJB14Q8TBM8 379 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 RITA1Q96K30 269 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 C5orf34Q96MH7 638 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 PRR25Q96S07 402 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 MPHOSPH8Q99549 860 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 MACROD1Q9BQ69 325 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 VN1R3Q9BXE9 311 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 QTRT1Q9BXR0 403 aaKnown RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 PRSS22Q9GZN4 317 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 TMX4Q9H1E5 349 aaPredicted RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 FAM83DQ9H4H8 585 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 GEMIN8Q9NWZ8 242 aaKnown RBP3.76□□□□□ -1.81
VPS13B-209ENST00000521559 HDAC9Q9UKV0 1011 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 RIPOR2Q9Y4F9 1068 aa3.76□□□□□ -1.81
VPS13B-209ENST00000521559 QSER1Q2KHR3 1735 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 SCN7AQ01118 1682 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 PNMA6EA0A0J9YXQ4 647 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 TMEM233B4DJY2 109 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 GOLIM4O00461 696 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 DSCR3O14972 297 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 CD3EAPO15446 510 aaKnown RBP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 TMPRSS11DO60235 418 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 SRGAP2O75044 1071 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 RNF8O76064 485 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 BMP15O95972 392 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 HRGP04196 525 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 UQCRC1P31930 480 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 IL15P40933 162 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 FAM193AP78312 1265 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 IRX6P78412 446 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 G3BP1Q13283 466 aaKnown RBP eCLIP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 PTCHD3Q3KNS1 767 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 LRRC24Q50LG9 513 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 PXDC1Q5TGL8 231 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 RNF220Q5VTB9 566 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 APOA5Q6Q788 366 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 ZNF813Q6ZN06 617 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 CCDC149Q6ZUS6 474 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 C14orf80Q86SX3 495 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 MICU3Q86XE3 530 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 CNGA4Q8IV77 575 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 SDR16C5Q8N3Y7 309 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 OR56A3Q8NH54 315 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 LRTOMTQ8WZ04 291 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 MAML1Q92585 1016 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 APIPQ96GX9 242 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 C8orf48Q96LL4 319 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 FCRL4Q96PJ5 515 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 TMEM79Q9BSE2 394 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 PUS3Q9BZE2 481 aaKnown RBP3.75□□□□□ -1.81
VPS13B-209ENST00000521559 ANKRD2Q9GZV1 360 aa3.75□□□□□ -1.81
VPS13B-209ENST00000521559 ZNF287Q9HBT7 754 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 355.5 ms