RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CFAP52Q8N1V2 620 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 UCMAQ8WVF2 138 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 SORCS1Q8WY21 1168 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 RUBCNQ92622 972 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 PGAP3Q96FM1 320 aaPredicted RBP21.38■■□□□ 1.01
TRIM35-203ENST00000521253 PRMT1Q99873 361 aaKnown RBP21.38■■□□□ 1.01
TRIM35-203ENST00000521253 SYT11Q9BT88 431 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 METTL5Q9NRN9 209 aaKnown RBP21.38■■□□□ 1.01
TRIM35-203ENST00000521253 ADAM22Q9P0K1 906 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 THAP10Q9P2Z0 257 aaPredicted RBP21.38■■□□□ 1.01
TRIM35-203ENST00000521253 GGA2Q9UJY4 613 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 RAB23Q9ULC3 237 aa21.38■■□□□ 1.01
TRIM35-203ENST00000521253 MYO18AQ92614 2054 aaKnown RBP21.38■■□□□ 1.01
TRIM35-203ENST00000521253 TCRBV21S2A2A0A5A6 115 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 WASH3PC4AMC7 463 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 F5H5T6 163 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 PABPC1P11940 636 aaKnown RBP21.37■■□□□ 1.01
TRIM35-203ENST00000521253 CD70P32970 193 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 PBX1P40424 430 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 CXCR3P49682 368 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 E4F1Q66K89 784 aaPredicted RBP21.37■■□□□ 1.01
TRIM35-203ENST00000521253 ARCQ7LC44 396 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 KIAA0907Q7Z7F0 614 aaPredicted RBP21.37■■□□□ 1.01
TRIM35-203ENST00000521253 ADIPOR2Q86V24 386 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 EMC1Q8N766 993 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 OLIG1Q8TAK6 271 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 WFIKKN2Q8TEU8 576 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 HMGB4Q8WW32 186 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 ERLEC1Q96DZ1 483 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 EDEM3Q9BZQ6 932 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 CD248Q9HCU0 757 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 RAD54BQ9Y620 910 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 STON1Q9Y6Q2 735 aa21.37■■□□□ 1.01
TRIM35-203ENST00000521253 TIMM44O43615 452 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 ADCY5O95622 1261 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 IL12RB1P42701 662 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 ATXN1P54253 815 aaKnown RBP21.36■■□□□ 1.01
TRIM35-203ENST00000521253 DEUP1Q05D60 604 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 ASIC2Q16515 512 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 FIGNQ5HY92 759 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 SFMBT2Q5VUG0 894 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 KIAA1211LQ6NV74 962 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 LRSAM1Q6UWE0 723 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 CHST9Q7L1S5 443 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 AHI1Q8N157 1196 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 CARNMT1Q8N4J0 409 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 DCLK2Q8N568 766 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 ZNF557Q8N988 423 aaPredicted RBP21.36■■□□□ 1.01
TRIM35-203ENST00000521253 FIBINQ8TAL6 211 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 LMLNQ96KR4 655 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 CFAP57Q96MR6 1250 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 HINFPQ9BQA5 517 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 TSPY26PQ9H489 355 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 WDCPQ9H6R7 721 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 ANLNQ9NQW6 1124 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 AIPL1Q9NZN9 384 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 IFNKQ9P0W0 207 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 BCCIPQ9P287 314 aaKnown RBP eCLIP21.36■■□□□ 1.01
TRIM35-203ENST00000521253 NCDNQ9UBB6 729 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 HS3ST4Q9Y661 456 aa21.36■■□□□ 1.01
TRIM35-203ENST00000521253 I6L893 689 aaPredicted RBP21.35■■□□□ 1.01
TRIM35-203ENST00000521253 NPC1O15118 1278 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 PAGE1O75459 146 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 LUC7L3O95232 432 aaKnown RBP21.35■■□□□ 1.01
TRIM35-203ENST00000521253 GJB6O95452 261 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 F9P00740 461 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 CALB1P05937 261 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 GSCP56915 257 aaPredicted RBP21.35■■□□□ 1.01
TRIM35-203ENST00000521253 LMAN2Q12907 356 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 MTA1Q13330 715 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 CDH18Q13634 790 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 ENPP2Q13822 863 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 AUHQ13825 339 aaKnown RBP21.35■■□□□ 1.01
TRIM35-203ENST00000521253 ZNF234Q14588 700 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 USP39Q53GS9 565 aaKnown RBP21.35■■□□□ 1.01
TRIM35-203ENST00000521253 BRMS1LQ5PSV4 323 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 LAIR1Q6GTX8 287 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 FBXL22Q6P050 247 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 SND1Q7KZF4 910 aaKnown RBP eCLIP21.35■■□□□ 1.01
TRIM35-203ENST00000521253 MON1BQ7L1V2 547 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 BNIPLQ7Z465 357 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 JOSD2Q8TAC2 188 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 TKTL2Q9H0I9 626 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 ARHGEF38Q9NXL2 777 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 INVSQ9Y283 1065 aa21.35■■□□□ 1.01
TRIM35-203ENST00000521253 DCLK1O15075 740 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 GABRG2P18507 467 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 TNFAIP3P21580 790 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 GGCXP38435 758 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 C1QBPQ07021 282 aaKnown RBP21.34■■□□□ 1.01
TRIM35-203ENST00000521253 FUT11Q495W5 492 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 FSCBQ5H9T9 825 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 MBLAC2Q68D91 279 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.34■■□□□ 1.01
TRIM35-203ENST00000521253 KBTBD6Q86V97 674 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 CIR1Q86X95 450 aaPredicted RBP21.34■■□□□ 1.01
TRIM35-203ENST00000521253 CCDC117Q8IWD4 279 aaPredicted RBP21.34■■□□□ 1.01
TRIM35-203ENST00000521253 PGBD3Q8N328 593 aa21.34■■□□□ 1.01
TRIM35-203ENST00000521253 FAM160A2Q8N612 972 aaPredicted RBP21.34■■□□□ 1.01
TRIM35-203ENST00000521253 CYB5D2Q8WUJ1 264 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms