RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 FASTKD3Q14CZ7 662 aaKnown RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 TRIP4Q15650 581 aaPredicted RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 MSS51Q4VC12 460 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 FNBP1LQ5T0N5 605 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 PIK3R6Q5UE93 754 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 SNX30Q5VWJ9 437 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 HEATR6Q6AI08 1181 aaKnown RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 C14orf80Q86SX3 495 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 GPR65Q8IYL9 337 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 ZNF683Q8IZ20 524 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 ZNF276Q8N554 614 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 HTR3CQ8WXA8 447 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 CLP1Q92989 425 aaKnown RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 P2RY11Q96G91 374 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 C1orf74Q96LT6 269 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 TMEM109Q9BVC6 243 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 CCSER2Q9H7U1 834 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 RAB6BQ9NRW1 208 aa13.24□□□□□ -0.29
PVT1-203ENST00000513868 OLA1Q9NTK5 396 aaKnown RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 MAGED2Q9UNF1 606 aaPredicted RBP13.24□□□□□ -0.29
PVT1-203ENST00000513868 E7ESA3 106 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 SMAPO00193 183 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 ALOX15BO15296 676 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 CHADO15335 359 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 FGF18O76093 207 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 ACSL3O95573 720 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 SRGAP2BP0DMP2 458 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 DNAJB2P25686 324 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 HTR7P34969 479 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 BASP1P80723 227 aaKnown RBP13.23□□□□□ -0.29
PVT1-203ENST00000513868 GALNT2Q10471 571 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 WASHC5Q12768 1159 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 CBLBQ13191 982 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 C10orf120Q5SQS8 335 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 CEP128Q6ZU80 1094 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 FIBCD1Q8N539 461 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 UHMK1Q8TAS1 419 aaKnown RBP13.23□□□□□ -0.29
PVT1-203ENST00000513868 DPF3Q92784 378 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 MYRFLQ96LU7 910 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 PHACTR1Q9C0D0 580 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 ZBP1Q9H171 429 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 SAYSD1Q9NPB0 183 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 MARCH2Q9P0N8 246 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 FNIP2Q9P278 1114 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 YIPF1Q9Y548 306 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 PCDHB12Q9Y5F1 795 aa13.23□□□□□ -0.29
PVT1-203ENST00000513868 A0A0A0MRY4 1105 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 ZNF840PA6NDX5 716 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 E9PAM4 449 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 PPP1R12AO14974 1030 aaPredicted RBP13.22□□□□□ -0.29
PVT1-203ENST00000513868 TEX28O15482 410 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 TLR5O60602 858 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 BANF1O75531 89 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 MOCS2O96007 188 aaPredicted RBP13.22□□□□□ -0.29
PVT1-203ENST00000513868 SLC2A3P11169 496 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 ACTN2P35609 894 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 PPIDQ08752 370 aaKnown RBP13.22□□□□□ -0.29
PVT1-203ENST00000513868 AP1B1Q10567 949 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 HIF1AQ16665 826 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 ANKRD20A2Q5SQ80 823 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 FAXCQ5TGI0 409 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 ANKRD20A1Q5TYW2 823 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 ANKRD20A3Q5VUR7 823 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 KCTD16Q68DU8 428 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 C4orf22Q6V702 233 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 PDZD4Q76G19 769 aaPredicted RBP13.22□□□□□ -0.29
PVT1-203ENST00000513868 GOLGA6L1Q8N7Z2 621 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
PVT1-203ENST00000513868 OVCA2Q8WZ82 227 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 ATP6V1G3Q96LB4 118 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 SPATA13Q96N96 652 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 WDR83Q9BRX9 315 aaKnown RBP13.22□□□□□ -0.29
PVT1-203ENST00000513868 ETNK1Q9HBU6 452 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 RXFP1Q9HBX9 757 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 MRPL17Q9NRX2 175 aaKnown RBP13.22□□□□□ -0.29
PVT1-203ENST00000513868 PRKAG2Q9UGJ0 569 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 INSL6Q9Y581 213 aa13.22□□□□□ -0.29
PVT1-203ENST00000513868 GOLGA6CA6NDK9 693 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 RNF103O00237 685 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 NCAM2O15394 837 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 MYZAPP0CAP1 466 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 GOLGA6DP0CG33 693 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 CSH1P0DML2 217 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 CSH2P0DML3 217 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 CTSAP10619 480 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 RING1Q06587 406 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 PDIA2Q13087 525 aaKnown RBP13.21□□□□□ -0.29
PVT1-203ENST00000513868 MS4A13Q5J8X5 152 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 HP1BP3Q5SSJ5 553 aaPredicted RBP13.21□□□□□ -0.29
PVT1-203ENST00000513868 SYCP2LQ5T4T6 812 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.29
PVT1-203ENST00000513868 CENPUQ71F23 418 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 MIB1Q86YT6 1006 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 HERC6Q8IVU3 1022 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 ARHGAP12Q8IWW6 846 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 TCEAL8Q8IYN2 117 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 SH2D3CQ8N5H7 860 aa13.21□□□□□ -0.29
PVT1-203ENST00000513868 KLHL23Q8NBE8 558 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms