RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 FAM72CH0Y354 149 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 M0R296 226 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 GFRA2O00451 464 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 HOXC11O43248 304 aaPredicted RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 TBL1XO60907 577 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 LATS1O95835 1130 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 TARSP26639 723 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 IL1R2P27930 398 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 HOXD9P28356 352 aaPredicted RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 MIPP30301 263 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 OPRD1P41143 372 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 SSR1P43307 286 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 NOP2P46087 812 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 VAV2P52735 878 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 SIGLEC14Q08ET2 396 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 AUHQ13825 339 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 KCNT1Q5JUK3 1230 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 BRMS1LQ5PSV4 323 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 ADGRF1Q5T601 910 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 FAM72AQ5TYM5 149 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 CWF19L1Q69YN2 538 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 FAM72DQ6L9T8 149 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 TRIM67Q6ZTA4 783 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 CYP4V2Q6ZWL3 525 aaPredicted RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 FAM72BQ86X60 149 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 FAM217AQ8IXS0 508 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 CPXM2Q8N436 756 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 FNIP1Q8TF40 1166 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 DDI1Q8WTU0 396 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 IGSF8Q969P0 613 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 OTUB2Q96DC9 234 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 BTN2A3PQ96KV6 586 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 PRMT1Q99873 361 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 SNRNP25Q9BV90 132 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 ZWILCHQ9H900 591 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 TBC1D17Q9HA65 648 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 FBRSL1Q9HCM7 1045 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 ZDHHC4Q9NPG8 344 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 RBM12Q9NTZ6 932 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 DNAJC17Q9NVM6 304 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 UVRAGQ9P2Y5 699 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 IP6K2Q9UHH9 426 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 STOML2Q9UJZ1 356 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 ZNF510Q9Y2H8 683 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 DUSP10Q9Y6W6 482 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 E9PAM4 449 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 PI4K2BG5E9Z4 385 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 ARHGAP6O43182 974 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 SRGAP2O75044 1071 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 TULP3O75386 442 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 CNTN5O94779 1100 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 PROSCO94903 275 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 F9P00740 461 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 EGFP01133 1207 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 SLC2A3P11169 496 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 ALADP13716 330 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 TNNT1P13805 278 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 ADRA1BP35368 520 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 CHKAP35790 457 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 TAS2R40P59535 323 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 GAD2Q05329 585 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 UBXN2BQ14CS0 331 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 MPPE1Q53F39 396 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 FBXL22Q6P050 247 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 ETFBKMTQ8IXQ9 262 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 CARNMT1Q8N4J0 409 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 HJURPQ8NCD3 748 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 CCDC112Q8NEF3 446 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 FAM3CQ92520 227 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 HSPH1Q92598 858 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 EZH1Q92800 747 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 RPRD1AQ96P16 312 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 MFSD1Q9H3U5 465 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 LTB4R2Q9NPC1 389 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 TRPV5Q9NQA5 729 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 MPP6Q9NZW5 540 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 MARK1Q9P0L2 795 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 WNT16Q9UBV4 365 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 SLC12A6Q9UHW9 1150 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 INTUQ9ULD6 942 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 FZD10Q9ULW2 581 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 AP4E1Q9UPM8 1137 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 MTF2Q9Y483 593 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 PAXBP1Q9Y5B6 917 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 ADGRG1Q9Y653 693 aa10.13□□□□□ -0.79
TOPBP1-209ENST00000513818 MACROD2A1Z1Q3 448 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 MYO1FO00160 1098 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 CREB3O43889 395 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 PRPSAP2O60256 369 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 CACNG3O60359 315 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 BUB1BO60566 1050 aaPredicted RBP10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 RNF8O76064 485 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 MTA2O94776 668 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 PENKP01210 267 aaPredicted RBP10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 CYBBP04839 570 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 DESP17661 470 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 GALK1P51570 392 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 SEC13P55735 322 aa10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 SLC25A11Q02978 314 aaKnown RBP10.12□□□□□ -0.79
TOPBP1-209ENST00000513818 PRKCQQ04759 706 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms