RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 KDM5DQ9BY66 1539 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 LTBP4Q8N2S1 1624 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 CCDC187A0A096LP49 1063 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 PIPSLA2A3N6 862 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 WDR27A2RRH5 827 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 VWA3AA6NCI4 1184 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 AGAP5A6NIR3 686 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 MBD3L5A6NJ08 208 aaPredicted RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 SAC3D1A6NKF1 404 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 ANP32CO43423 234 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 HEXIM1O94992 359 aaKnown RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 HNRNPA1P09651 372 aaKnown RBP eCLIP4.47□□□□□ -1.69
GYPB-214ENST00000513557 C1SP09871 688 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 IFIT1P09914 478 aaKnown RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 NR2F6P10588 404 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 CPA1P15085 419 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 CTGFP29279 349 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 FOLR3P41439 243 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 RPL15P61313 204 aaKnown RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 TXNL4AP83876 142 aaKnown RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 DEUP1Q05D60 604 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.47□□□□□ -1.695e-6■□□□□ 10.7
GYPB-214ENST00000513557 MYBPC2Q14324 1141 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 TXNRD1Q16881 649 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 NBPF8Q3BBV2 869 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 PLAC9Q5JTB6 97 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 DENND2CQ68D51 928 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 KCNV1Q6PIU1 500 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 RNF207Q6ZRF8 634 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 Q6ZWC4 215 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 PARS2Q7L3T8 475 aaKnown RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 TSPYL6Q8N831 410 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 ANKRD44Q8N8A2 993 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 PNPLA1Q8N8W4 532 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 RP9Q8TA86 221 aaKnown RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 CXorf38Q8TB03 319 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 SLC2A12Q8TD20 617 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 ST8SIA4Q92187 359 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 TFAP2BQ92481 460 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 RBM17Q96I25 401 aaKnown RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 PIGSQ96S52 555 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 CINPQ9BW66 212 aaPredicted RBP4.47□□□□□ -1.69
GYPB-214ENST00000513557 WDR11Q9BZH6 1224 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 RMI1Q9H9A7 625 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 ARHGEF3Q9NR81 526 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 CLIC5Q9NZA1 410 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 MGAT4CQ9UBM8 478 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 AMFRQ9UKV5 643 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 TBX20Q9UMR3 447 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 SLC12A4Q9UP95 1085 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 PCDHB2Q9Y5E7 798 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 KANK1Q14678 1352 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 PLXNC1O60486 1568 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 UGGT1Q9NYU2 1555 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 MROH2AA6NES4 1674 aa4.47□□□□□ -1.69
GYPB-214ENST00000513557 NPHP4O75161 1426 aaPredicted RBP4.46□□□□□ -1.69
GYPB-214ENST00000513557 MYOM3Q5VTT5 1437 aa4.46□□□□□ -1.69
GYPB-214ENST00000513557 DNMT1P26358 1616 aaKnown RBP4.46□□□□□ -1.69
GYPB-214ENST00000513557 PZPP20742 1482 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 SHANK2Q9UPX8 1470 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 MPPED1O15442 326 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 KLK10O43240 276 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 HNRNPRO43390 633 aaKnown RBP4.46□□□□□ -1.7
GYPB-214ENST00000513557 FIBPO43427 364 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 BAIAP3O94812 1187 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 TBX18O95935 607 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 TMIGD3P0DMS9 266 aaPredicted RBP4.46□□□□□ -1.7
GYPB-214ENST00000513557 VDRP11473 427 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 CYP2C18P33260 490 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 GRK5P34947 590 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 IGHMBP2P38935 993 aaKnown RBP4.46□□□□□ -1.7
GYPB-214ENST00000513557 PCP4P48539 62 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 BLOC1S1P78537 153 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 CCDC15Q0P6D6 951 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 DNASE1L3Q13609 305 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 DCTN1Q14203 1278 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 FAM187BQ17R55 369 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 LRRC24Q50LG9 513 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 FAM133BQ5BKY9 247 aaKnown RBP4.46□□□□□ -1.7
GYPB-214ENST00000513557 LY6G5CQ5SRR4 150 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 KAZNQ674X7 775 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 ACSM6Q6P461 480 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 C16orf89Q6UX73 402 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 USP51Q70EK9 711 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 RHOUQ7L0Q8 258 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 ZNF551Q7Z340 670 aaPredicted RBP4.46□□□□□ -1.7
GYPB-214ENST00000513557 KRT77Q7Z794 578 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 ABHD11Q8NFV4 315 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 LINS1Q8NG48 757 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 OR52L2PQ8NGH6 319 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 PROKR1Q8TCW9 393 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 CACTINQ8WUQ7 758 aaKnown RBP4.46□□□□□ -1.7
GYPB-214ENST00000513557 STAMQ92783 540 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 PRR11Q96HE9 360 aaPredicted RBP4.46□□□□□ -1.7
GYPB-214ENST00000513557 C20orf173Q96LM9 149 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 SAP30LQ9HAJ7 183 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 PREBQ9HCU5 417 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 TSC22D4Q9Y3Q8 395 aa4.46□□□□□ -1.7
GYPB-214ENST00000513557 AFG3L2Q9Y4W6 797 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms