RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SERINC1Q9NRX5 453 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 UCKL1Q9NWZ5 548 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 SOHLH2Q9NX45 425 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 TAB2Q9NYJ8 693 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 TRPM5Q9NZQ8 1165 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 PADI4Q9UM07 663 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 NAALADL1Q9UQQ1 740 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 COMMD3-BMI1R4GMX3 469 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 FOCADQ5VW36 1801 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 TRAV34A0A0B4J273 112 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 SYCE3A1L190 88 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 GOLGA6L4A6NEF3 574 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 LRRIQ3A6PVS8 624 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 EREGO14944 169 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 ST8SIA5O15466 376 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 ARHGAP6O43182 974 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 STRNO43815 780 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 GMFGO60234 142 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 LRRN2O75325 713 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 PAGE1O75459 146 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 PPM1BO75688 479 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 TSPAN9O75954 239 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 SEC24DO94855 1032 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 PNPP00491 289 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 TYMPP19971 482 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 CHRM3P20309 590 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 ADSSP30520 456 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 GCH1P30793 250 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 GUCY1A2P33402 732 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 NUP62P37198 522 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 MAGEA4P43358 317 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 RNF144AP50876 292 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 EIF3EP60228 445 aaKnown RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 PPATQ06203 517 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 CYP2A13Q16696 494 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 HFEQ30201 348 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 ANO6Q4KMQ2 910 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 MPP7Q5T2T1 576 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 FAXCQ5TGI0 409 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 CES4AQ5XG92 561 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 DENND5AQ6IQ26 1287 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 ARMCX2Q7L311 632 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 MRPL10Q7Z7H8 261 aaKnown RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 SGMS1Q86VZ5 419 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 DENND6AQ8IWF6 608 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 MYCBPAPQ8TBZ2 947 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 MAP4K1Q92918 833 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 C19orf60Q96EN9 201 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 GDAP1L1Q96MZ0 367 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 FAM111AQ96PZ2 611 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 SH3GL2Q99962 352 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 APOL6Q9BWW8 343 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 LRRC2Q9BYS8 371 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 FAM129AQ9BZQ8 928 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 R3HDMLQ9H3Y0 253 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 IGFLR1Q9H665 355 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 DENND2DQ9H6A0 471 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 MVB12BQ9H7P6 319 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZMAT3Q9HA38 289 aaKnown RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZNF287Q9HBT7 754 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 FAM114A2Q9NRY5 505 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 TMEM39AQ9NV64 488 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 INTS13Q9NVM9 706 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 SLC8A2Q9UPR5 921 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 USP20Q9Y2K6 914 aa5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 COL2A1P02458 1487 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC11-208ENST00000511955 MKI67P46013 3256 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 XKRY2A2RUG3 117 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 URADA6NGE7 173 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 HMX3A6NHT5 357 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 BTBD19C9JJ37 291 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 E7EWF7 191 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 E9PBE3 544 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 F8W8V4 182 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 PDHXO00330 501 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 KHNYNO15037 678 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 HNRNPRO43390 633 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 ACTN4O43707 911 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 URODP06132 367 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 NCF1P14598 390 aaPredicted RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 ZFXP17010 805 aaPredicted RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 C5AR1P21730 350 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 CCT6AP40227 531 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 WNT5AP41221 380 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 PPP1R2P41236 205 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 RANBP1P43487 201 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 AFMP43652 599 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 CORO7P57737 925 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 FAM189BP81408 668 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 TRAP1Q12931 704 aaKnown RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 PPIL2Q13356 520 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 ITGA7Q13683 1181 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 KCNC3Q14003 757 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 POLD3Q15054 466 aaPredicted RBP5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 NCF4Q15080 339 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 PGS1Q32NB8 556 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 CCDC14Q49A88 953 aa5.19□□□□□ -1.58
TRAPPC11-208ENST00000511955 PPP1R2P3Q6NXS1 205 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms