RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 WASP42768 502 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 CFHR1Q03591 330 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 UBE3AQ05086 875 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 FOXI1Q12951 378 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 PTPN14Q15678 1187 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 ABHD17BQ5VST6 288 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 ARMC6Q6NXE6 501 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 ANKRD44Q8N8A2 993 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 LSM14AQ8ND56 463 aaKnown RBP6.22□□□□□ -1.41
GYPB-212ENST00000511198 MORC4Q8TE76 937 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 NRG4Q8WWG1 115 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 CLDN23Q96B33 292 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 ZSWIM1Q9BR11 485 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 RAVER2Q9HCJ3 691 aaKnown RBP6.22□□□□□ -1.41
GYPB-212ENST00000511198 MYH7BA7E2Y1 1941 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 SDK1Q7Z5N4 2213 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 MGAQ8IWI9 3026 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 URB1O60287 2271 aaKnown RBP6.22□□□□□ -1.41
GYPB-212ENST00000511198 NAV1Q8NEY1 1877 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 F5H6K3 240 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 EYA2O00167 538 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 MPHOSPH10O00566 681 aaKnown RBP6.21□□□□□ -1.42
GYPB-212ENST00000511198 TEX33O43247 280 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 CDKL5O76039 1030 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 FGF18O76093 207 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 GP1BBP13224 206 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 GATMP50440 423 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 SEC24CP53992 1094 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 DYNLL1P63167 89 aaKnown RBP6.21□□□□□ -1.42
GYPB-212ENST00000511198 MTAPQ13126 283 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 ATP2B3Q16720 1220 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 RABL6Q3YEC7 729 aaPredicted RBP6.21□□□□□ -1.42
GYPB-212ENST00000511198 FAM83BQ5T0W9 1011 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 FAM9BQ8IZU0 186 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 PPM1NQ8N819 430 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 C1orf162Q8NEQ5 155 aaPredicted RBP6.21□□□□□ -1.42
GYPB-212ENST00000511198 SSH1Q8WYL5 1049 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 FUBP1Q96AE4 644 aaKnown RBP6.21□□□□□ -1.42
GYPB-212ENST00000511198 CCDC136Q96JN2 1154 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 MYADMQ96S97 322 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 BICC1Q9H694 974 aaKnown RBP6.21□□□□□ -1.42
GYPB-212ENST00000511198 A1CFQ9NQ94 594 aaKnown RBP6.21□□□□□ -1.42
GYPB-212ENST00000511198 TMEM74BQ9NUR3 256 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 TUBD1Q9UJT1 453 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 RUVBL1Q9Y265 456 aaKnown RBP6.21□□□□□ -1.42
GYPB-212ENST00000511198 TTC3P53804 2025 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 MYH1P12882 1939 aa6.21□□□□□ -1.42
GYPB-212ENST00000511198 FOSP01100 380 aaPredicted RBP6.2□□□□□ -1.42
GYPB-212ENST00000511198 NBPF7P0C2Y1 421 aaPredicted RBP6.2□□□□□ -1.42
GYPB-212ENST00000511198 HKR1P10072 659 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 TYRP1P17643 537 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 DDCP20711 480 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 CSRP1P21291 193 aaKnown RBP6.2□□□□□ -1.42
GYPB-212ENST00000511198 FGFR4P22455 802 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 AVPR1BP47901 424 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 GABPAQ06546 454 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 CCDC184Q52MB2 194 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 BRDTQ58F21 947 aaPredicted RBP6.2□□□□□ -1.42
GYPB-212ENST00000511198 TCEAL6Q6IPX3 200 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 GPR149Q86SP6 731 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 AMOTL1Q8IY63 956 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 CHCHD4Q8N4Q1 142 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 AFG1LQ8WV93 481 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 JADE3Q92613 823 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 TCEAL3Q969E4 200 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 KLHL5Q96PQ7 755 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 NUP88Q99567 741 aaPredicted RBP6.2□□□□□ -1.42
GYPB-212ENST00000511198 C7orf25Q9BPX7 421 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 ALOXE3Q9BYJ1 711 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 REXO4Q9GZR2 422 aaKnown RBP6.2□□□□□ -1.42
GYPB-212ENST00000511198 RNPEPQ9H4A4 650 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 MANSC1Q9H8J5 431 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 C9orf78Q9NZ63 289 aaPredicted RBP6.2□□□□□ -1.42
GYPB-212ENST00000511198 RAI14Q9P0K7 980 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 HMG20BQ9P0W2 317 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 FBXO40Q9UH90 709 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 INTUQ9ULD6 942 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 DOCK8Q8NF50 2099 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 KIAA1217Q5T5P2 1943 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 LRRK2Q5S007 2527 aa6.2□□□□□ -1.42
GYPB-212ENST00000511198 USP9YO00507 2555 aaPredicted RBP6.19□□□□□ -1.42
GYPB-212ENST00000511198 LCTP09848 1927 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 PCDHGA12O60330 932 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 BAG3O95817 575 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 ITGAMP11215 1152 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 MAGEA9P43362 315 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 RFX5P48382 616 aaPredicted RBP6.19□□□□□ -1.42
GYPB-212ENST00000511198 GPC5P78333 572 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 BLOC1S1P78537 153 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 MXRA7P84157 204 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 KRTAP21-3Q3LHN1 58 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 PGM2L1Q6PCE3 622 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 CCDC149Q6ZUS6 474 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 SERINC5Q86VE9 423 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 DEFB124Q8NES8 71 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 APBB2Q92870 758 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 NACC2Q96BF6 587 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 BOD1Q96IK1 185 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 SLF1Q9BQI6 1058 aa6.19□□□□□ -1.42
GYPB-212ENST00000511198 STK31Q9BXU1 1019 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms