RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	DEFB106A	Q8N104	65 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	AHI1	Q8N157	1196 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	C1orf131	Q8NDD1	294 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	ENOX1	Q8TC92	643 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	PPP1R13B	Q96KQ4	1090 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	SLC2A13	Q96QE2	648 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	NAA15	Q9BXJ9	866 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	TMEM245	Q9H330	911 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	ASNSD1	Q9NWL6	643 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	TAB2	Q9NYJ8	693 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	STIM2	Q9P246	746 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	USP36	Q9P275	1121 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	INTS6	Q9UL03	887 aa	Known RBP	12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	NFE2L3	Q9Y4A8	694 aa		12.5	□□□□□ -0.41
CHFR-208	ENST00000511001	TP53BP1	Q12888	1972 aa	Predicted RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	C4orf47	A7E2U8	309 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	CAPN9	O14815	690 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	ZBTB24	O43167	697 aa	Predicted RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	MOCS2	O96007	188 aa	Predicted RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	ERBB2	P04626	1255 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	GLI1	P08151	1106 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	C7	P10643	843 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	ZNF33A	Q06730	810 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	LMAN2	Q12907	356 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	CAMK2G	Q13555	558 aa	Predicted RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	E2F5	Q15329	346 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	DCAF6	Q58WW2	860 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	TRIM61	Q5EBN2	209 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	CDKAL1	Q5VV42	579 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	IL31	Q6EBC2	164 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	SLC23A3	Q6PIS1	610 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	OLFML1	Q6UWY5	402 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	SERPINA13P	Q6UXR4	307 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	TMPRSS6	Q8IU80	811 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	ZNF366	Q8N895	744 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	HJURP	Q8NCD3	748 aa	Predicted RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	FIBIN	Q8TAL6	211 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	MYO19	Q96H55	970 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	DDX50	Q9BQ39	737 aa	Known RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	TRIM62	Q9BVG3	475 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	LSM14B	Q9BX40	385 aa	Known RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	PRDM16	Q9HAZ2	1276 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	PLCB1	Q9NQ66	1216 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	ITM2C	Q9NQX7	267 aa		12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	WSB2	Q9NYS7	404 aa	Predicted RBP	12.49	□□□□□ -0.41
CHFR-208	ENST00000511001	KNL1	Q8NG31	2342 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	KCNU1	A8MYU2	1149 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	SYNCRIP	O60506	623 aa	Known RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	GRAP2	O75791	330 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	APOE	P02649	317 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	EPHX1	P07099	455 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	DLD	P09622	509 aa	Known RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	UCHL3	P15374	230 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	TACR2	P21452	398 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	EEF1G	P26641	437 aa	Known RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	CDH5	P33151	784 aa	Predicted RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	RAPGEF1	Q13905	1077 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	FSCB	Q5H9T9	825 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	EFHC1	Q5JVL4	640 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	OTUD1	Q5VV17	481 aa	Predicted RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	RAP1GAP2	Q684P5	730 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	OR6B2	Q6IFH4	312 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	SLC26A9	Q7LBE3	791 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	MFN1	Q8IWA4	741 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	LGI2	Q8N0V4	545 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	CFAP52	Q8N1V2	620 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	ZNF397	Q8NF99	534 aa	Predicted RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	OR2T3	Q8NH03	318 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	DDX1	Q92499	740 aa	Known RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	TTC17	Q96AE7	1141 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	SIPA1	Q96FS4	1042 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	HSPA12B	Q96MM6	686 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	PRMT1	Q99873	361 aa	Known RBP	12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	ADAM33	Q9BZ11	813 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	GAN	Q9H2C0	597 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	FSCN3	Q9NQT6	498 aa		12.48	□□□□□ -0.41
CHFR-208	ENST00000511001	DOCK9	Q9BZ29	2069 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	BAHCC1	Q9P281	2608 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	FAM208B	Q5VWN6	2430 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	TMEM131	Q92545	1883 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	PES1	O00541	588 aa	Known RBP	12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	HSF2BP	O75031	334 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	DAB1	O75553	588 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	LUC7L3	O95232	432 aa	Known RBP	12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	IGLV3-19	P01714	112 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	CYP11B1	P15538	503 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	POLR2E	P19388	210 aa	Known RBP	12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	CD6	P30203	668 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	HOXD12	P35452	270 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	KRT9	P35527	623 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	CSK	P41240	450 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	DPP6	P42658	865 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	KLK7	P49862	253 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	TPMT	P51580	245 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	BPIFB4	P59827	614 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	CDK17	Q00537	523 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	SLC6A3	Q01959	620 aa		12.47	□□□□□ -0.41
CHFR-208	ENST00000511001	ARID5A	Q03989	594 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms