RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SLC12A6Q9UHW9 1150 aa12.17□□□□□ -0.46
HMGXB3-203ENST00000510472 STAP1Q9ULZ2 295 aa12.17□□□□□ -0.46
HMGXB3-203ENST00000510472 ITIH6Q6UXX5 1313 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 SIGLEC16A6NMB1 481 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 NPC1O15118 1278 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 PAGE1O75459 146 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 ADCY5O95622 1261 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 MOCS2O96007 188 aaPredicted RBP12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 LMNAP02545 664 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 CALB1P05937 261 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 C7P10643 843 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 GZMAP12544 262 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 ABCB4P21439 1286 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 TNFAIP3P21580 790 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 RFC1P35251 1148 aaPredicted RBP12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 ATXN1P54253 815 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 ZBED6P86452 979 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 DEUP1Q05D60 604 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 EIF4HQ15056 248 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 ASIC2Q16515 512 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 CCDC14Q49A88 953 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 FSCBQ5H9T9 825 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 BRMS1LQ5PSV4 323 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 RAP1GAP2Q684P5 730 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 FBXL22Q6P050 247 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 TRMT11Q7Z4G4 463 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 ANKS1BQ7Z6G8 1248 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 PHLDB2Q86SQ0 1253 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 LGI2Q8N0V4 545 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 CFAP52Q8N1V2 620 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 EMC1Q8N766 993 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 C3orf20Q8ND61 904 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 RXFP2Q8WXD0 754 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 VCPIP1Q96JH7 1222 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 C1orf74Q96LT6 269 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 CFAP57Q96MR6 1250 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 WDCPQ9H6R7 721 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 ABCB8Q9NUT2 735 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 INTS6Q9UL03 887 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 HS3ST4Q9Y661 456 aa12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 RIF1Q5UIP0 2472 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-203ENST00000510472 PTPRZ1P23471 2315 aaPredicted RBP12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 SYNJ2BP-COX16A0A087WUM0 186 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 WASH3PC4AMC7 463 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 AXIN1O15169 862 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 GJB6O95452 261 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 GYPCP04921 128 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 PABPC1P11940 636 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 KRT3P12035 628 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 SKILP12757 684 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 PDGFRAP16234 1089 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 HNRNPH3P31942 346 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 CD70P32970 193 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 PTPN9P43378 593 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 SULT1E1P49888 294 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 KLHL30Q0D2K2 578 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 SRSF5Q13243 272 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 AUHQ13825 339 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 ARID5BQ14865 1188 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 RAB6CQ53S08 254 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 SH3PXD2AQ5TCZ1 1133 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 WDR59Q6PJI9 974 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 C14orf80Q86SX3 495 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 ZNF557Q8N988 423 aaPredicted RBP12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 RNF214Q8ND24 703 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 TSTD1Q8NFU3 115 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 WFIKKN2Q8TEU8 576 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 SORCS1Q8WY21 1168 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 RNF34Q969K3 372 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 IGSF8Q969P0 613 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 TTC17Q96AE7 1141 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 TKTL2Q9H0I9 626 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 RAB6CQ9H0N0 254 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 TMEM245Q9H330 911 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 METTL5Q9NRN9 209 aaKnown RBP12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 COX16Q9P0S2 106 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 STIM2Q9P246 746 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 GGA2Q9UJY4 613 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 STON1Q9Y6Q2 735 aa12.15□□□□□ -0.46
HMGXB3-203ENST00000510472 USP34Q70CQ2 3546 aa12.15□□□□□ -0.47
HMGXB3-203ENST00000510472 ATG2BQ96BY7 2078 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 IGLV3-10A0A075B6K4 115 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 DRGXA6NNA5 263 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 F5H5T6 163 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 AP5Z1O43299 807 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 GFRA3O60609 400 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 LUC7L3O95232 432 aaKnown RBP12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 RRM1P23921 792 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 RDXP35241 583 aaKnown RBP12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 IL12RB1P42701 662 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 IRAK1P51617 712 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 HDAC4P56524 1084 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 LMAN2Q12907 356 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 MAMLD1Q13495 774 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 PTPRNQ16849 979 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 C15orf59Q2T9L4 293 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 FUT11Q495W5 492 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 ACBD5Q5T8D3 534 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 PLEKHA7Q6IQ23 1121 aa12.14□□□□□ -0.47
HMGXB3-203ENST00000510472 KIAA1211LQ6NV74 962 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms