RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 SERPINA13PQ6UXR4 307 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 AHI1Q8N157 1196 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 CFAP52Q8N1V2 620 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 HJURPQ8NCD3 748 aaPredicted RBP18.6■□□□□ 0.57
TPM3-220ENST00000509601 ENOX1Q8TC92 643 aaKnown RBP18.6■□□□□ 0.57
TPM3-220ENST00000509601 TTC17Q96AE7 1141 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 SIPA1Q96FS4 1042 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 TRIM62Q9BVG3 475 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 ASNSD1Q9NWL6 643 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 PLA2G4CQ9UP65 541 aa18.6■□□□□ 0.57
TPM3-220ENST00000509601 TPRP12270 2363 aaKnown RBP18.6■□□□□ 0.57
TPM3-220ENST00000509601 ASCC3Q8N3C0 2202 aaKnown RBP18.59■□□□□ 0.57
TPM3-220ENST00000509601 ATXN2Q99700 1313 aaKnown RBP18.59■□□□□ 0.57
TPM3-220ENST00000509601 KCNU1A8MYU2 1149 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 MOCS2O96007 188 aaPredicted RBP18.59■□□□□ 0.57
TPM3-220ENST00000509601 DLDP09622 509 aaKnown RBP18.59■□□□□ 0.57
TPM3-220ENST00000509601 EEF1GP26641 437 aaKnown RBP18.59■□□□□ 0.57
TPM3-220ENST00000509601 CD6P30203 668 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 KRT9P35527 623 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 DPP6P42658 865 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 TPMTP51580 245 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 ARID5AQ03989 594 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 LMAN2Q12907 356 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 EFHC1Q5JVL4 640 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 FAM183BPQ6ZVS7 135 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 ZNF366Q8N895 744 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 C1orf131Q8NDD1 294 aaKnown RBP18.59■□□□□ 0.57
TPM3-220ENST00000509601 OR2T3Q8NH03 318 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 TOE1Q96GM8 510 aaKnown RBP18.59■□□□□ 0.57
TPM3-220ENST00000509601 MYO19Q96H55 970 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 TMEM9BQ9NQ34 198 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 PLCB1Q9NQ66 1216 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.59■□□□□ 0.57
TPM3-220ENST00000509601 NFE2L3Q9Y4A8 694 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 FHOD1Q9Y613 1164 aa18.59■□□□□ 0.57
TPM3-220ENST00000509601 GRAP2O75791 330 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 KCNK5O95279 499 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 IGLV3-19P01714 112 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 ERBB2P04626 1255 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 POLR2EP19388 210 aaKnown RBP18.58■□□□□ 0.56
TPM3-220ENST00000509601 HOXD12P35452 270 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 BPIFB4P59827 614 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 CDK17Q00537 523 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 SLC6A3Q01959 620 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 DUOXA1Q1HG43 343 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 PTPN20Q4JDL3 420 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 FNDC3BQ53EP0 1204 aaKnown RBP18.58■□□□□ 0.56
TPM3-220ENST00000509601 RAP1GAP2Q684P5 730 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 OR6B2Q6IFH4 312 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 OLFML1Q6UWY5 402 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 MMS22LQ6ZRQ5 1243 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 C11orf57Q6ZUT1 292 aaPredicted RBP18.58■□□□□ 0.56
TPM3-220ENST00000509601 MFN1Q8IWA4 741 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 CARNMT1Q8N4J0 409 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 PRCCQ92733 491 aaPredicted RBP18.58■□□□□ 0.56
TPM3-220ENST00000509601 BTN2A3PQ96KV6 586 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 HSPA12BQ96MM6 686 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 PRMT1Q99873 361 aaKnown RBP18.58■□□□□ 0.56
TPM3-220ENST00000509601 NUSAP1Q9BXS6 441 aaKnown RBP18.58■□□□□ 0.56
TPM3-220ENST00000509601 CAPN10Q9HC96 672 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 PRSS16Q9NQE7 514 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 SLC6A14Q9UN76 642 aa18.58■□□□□ 0.56
TPM3-220ENST00000509601 NDUFS2O75306 463 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 APOEP02649 317 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 ATP5BP06576 529 aaKnown RBP18.57■□□□□ 0.56
TPM3-220ENST00000509601 UCHL3P15374 230 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 CYP11B1P15538 503 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 TACR2P21452 398 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 CDH5P33151 784 aaPredicted RBP18.57■□□□□ 0.56
TPM3-220ENST00000509601 RAPGEF1Q13905 1077 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 N4BP2L1Q5TBK1 243 aaPredicted RBP18.57■□□□□ 0.56
TPM3-220ENST00000509601 CDKAL1Q5VV42 579 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 LGI2Q8N0V4 545 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 ZNF557Q8N988 423 aaPredicted RBP18.57■□□□□ 0.56
TPM3-220ENST00000509601 CEP76Q8TAP6 659 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 MRGPRX3Q96LB0 322 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 NOX5Q96PH1 765 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 GPR174Q9BXC1 333 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 MTG2Q9H4K7 406 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 FSCN3Q9NQT6 498 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 TAB2Q9NYJ8 693 aa18.57■□□□□ 0.56
TPM3-220ENST00000509601 PCNX2A6NKB5 2137 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 NUMA1Q14980 2115 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 HSF2BPO75031 334 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 LUC7L3O95232 432 aaKnown RBP18.56■□□□□ 0.56
TPM3-220ENST00000509601 SERPINF2P08697 491 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 ENGP17813 658 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 MAOBP27338 520 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 OXTRP30559 389 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 CSKP41240 450 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 GABRB2P47870 512 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 DAB2IPQ5VWQ8 1189 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 SLC26A9Q7LBE3 791 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 ATP6V0D2Q8N8Y2 350 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 ZNF397Q8NF99 534 aaPredicted RBP18.56■□□□□ 0.56
TPM3-220ENST00000509601 DNASE2BQ8WZ79 361 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 STK33Q9BYT3 514 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 ADAM33Q9BZ11 813 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 VPS16Q9H269 839 aa18.56■□□□□ 0.56
TPM3-220ENST00000509601 SUN2Q9UH99 717 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms