RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 CTSOP43234 321 aaPredicted RBP13.93□□□□□ -0.18
DDX41-210ENST00000509576 CTSKP43235 329 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 BST2Q10589 180 aaKnown RBP13.93□□□□□ -0.18
DDX41-210ENST00000509576 LRMPQ12912 555 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 KCNJ12Q14500 433 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 FNDC3BQ53EP0 1204 aaKnown RBP13.93□□□□□ -0.18
DDX41-210ENST00000509576 FSCBQ5H9T9 825 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 PRAMEF14Q5SWL7 426 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 ADGRF1Q5T601 910 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 PIK3R6Q5UE93 754 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 ANKRD40Q6AI12 368 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 PDZD3Q86UT5 571 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 HSCBQ8IWL3 235 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 ARHGAP18Q8N392 663 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 LMO3Q8TAP4 145 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 SLC35F5Q8WV83 523 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 KCTD13Q8WZ19 329 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 SNX19Q92543 992 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 CAAP1Q9H8G2 361 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 XPO7Q9UIA9 1087 aaKnown RBP13.93□□□□□ -0.18
DDX41-210ENST00000509576 STRIP2Q9ULQ0 834 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 ANKRD6Q9Y2G4 727 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 PCDHGB2Q9Y5G2 931 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 TDRD6O60522 2096 aaKnown RBP13.93□□□□□ -0.18
DDX41-210ENST00000509576 PTPRQQ9UMZ3 2332 aa13.93□□□□□ -0.18
DDX41-210ENST00000509576 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 GOLGA8CPA6NN73 597 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 CYBBP04839 570 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 ACADMP11310 421 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 LCP1P13796 627 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 RPL13P26373 211 aaKnown RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 NUMBP49757 651 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 RPS24P62847 133 aaKnown RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 SGO2Q562F6 1265 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 DCAF17Q5H9S7 520 aaPredicted RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 SCML4Q8N228 414 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 RHBDD1Q8TEB9 315 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 HNRNPLLQ8WVV9 542 aaKnown RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 TMA16Q96EY4 203 aaKnown RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 FCRL2Q96LA5 508 aaPredicted RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 SLC6A18Q96N87 628 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 PCED1AQ9H1Q7 454 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 RSPH9Q9H1X1 276 aaPredicted RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 CCDC86Q9H6F5 360 aaKnown RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 LRRC4Q9HBW1 653 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 OSGEPQ9NPF4 335 aa13.92□□□□□ -0.18
DDX41-210ENST00000509576 APOBEC2Q9Y235 224 aaKnown RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 COL27A1Q8IZC6 1860 aaPredicted RBP13.92□□□□□ -0.18
DDX41-210ENST00000509576 FLRT2O43155 660 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 TIMM44O43615 452 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 TBL1XO60907 577 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 SIN3BO75182 1162 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 DLDP09622 509 aaKnown RBP13.91□□□□□ -0.18
DDX41-210ENST00000509576 CD19P15391 556 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 CD44P16070 742 aaKnown RBP13.91□□□□□ -0.18
DDX41-210ENST00000509576 BRD2P25440 801 aaKnown RBP13.91□□□□□ -0.18
DDX41-210ENST00000509576 GRIA4P48058 902 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 AFF3P51826 1226 aaKnown RBP13.91□□□□□ -0.18
DDX41-210ENST00000509576 METAP1P53582 386 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 PITX1P78337 314 aaPredicted RBP13.91□□□□□ -0.18
DDX41-210ENST00000509576 KRT85P78386 507 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 LCLAT1Q6UWP7 414 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 WFIKKN2Q8TEU8 576 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 NUCKS1Q9H1E3 243 aaKnown RBP13.91□□□□□ -0.18
DDX41-210ENST00000509576 OLA1Q9NTK5 396 aaKnown RBP13.91□□□□□ -0.18
DDX41-210ENST00000509576 MGAQ8IWI9 3026 aa13.91□□□□□ -0.18
DDX41-210ENST00000509576 TRABD2BA6NFA1 517 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 ACSL4O60488 711 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 FSBPO95073 299 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 LATS1O95835 1130 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 EPB41P11171 864 aaKnown RBP13.9□□□□□ -0.18
DDX41-210ENST00000509576 VDRP11473 427 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 CD27P26842 260 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 CSKP41240 450 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 HARS2P49590 506 aaKnown RBP13.9□□□□□ -0.18
DDX41-210ENST00000509576 CYP4F3Q08477 520 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 ACAP1Q15027 740 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 C9orf64Q5T6V5 341 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 TCERG1LQ5VWI1 586 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 GATAD2AQ86YP4 633 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 ARHGEF19Q8IW93 802 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 FMR1NBQ8N0W7 255 aaPredicted RBP13.9□□□□□ -0.18
DDX41-210ENST00000509576 AHI1Q8N157 1196 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 CFAP52Q8N1V2 620 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 AADATQ8N5Z0 425 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 CCDC150Q8NCX0 1101 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 SPATA20Q8TB22 786 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 TTC17Q96AE7 1141 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 SLC39A13Q96H72 371 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 FAM129BQ96TA1 746 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 BTBD1Q9H0C5 482 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 PABPC3Q9H361 631 aaKnown RBP13.9□□□□□ -0.18
DDX41-210ENST00000509576 CNGB3Q9NQW8 809 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 ABCC13Q9NSE7 274 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 STIM2Q9P246 746 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 DKK4Q9UBT3 224 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 CYTH4Q9UIA0 394 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 KALRNO60229 2985 aa13.9□□□□□ -0.18
DDX41-210ENST00000509576 HELZ2Q9BYK8 2649 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms