RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 DEUP1Q05D60 604 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 CCL15Q16663 113 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 XKR4Q5GH76 650 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 N4BP2L1Q5TBK1 243 aaPredicted RBP18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 DNAJB3Q8WWF6 145 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 ARNTL2Q8WYA1 636 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 NT5C3BQ969T7 300 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 PIH1D1Q9NWS0 290 aaKnown RBP18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 ZFATQ9P243 1243 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 EEF2KO00418 725 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 LIN7AO14910 233 aaPredicted RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 TOP3BO95985 862 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 F2P00734 622 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 ALDOAP04075 364 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 CPA2P48052 419 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 LILRA4P59901 499 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 SOX4Q06945 474 aaPredicted RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 NME3Q13232 169 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 RCN2Q14257 317 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 SNX17Q15036 470 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 PAFAH1B3Q15102 231 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 RCN1Q15293 331 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 CMPK2Q5EBM0 449 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 ACSBG2Q5FVE4 666 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 TRIM68Q6AZZ1 485 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 PDZD4Q76G19 769 aaPredicted RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 PPP1R13LQ8WUF5 828 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 NPY6RQ99463 290 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 CEP41Q9BYV8 373 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 C20orf27Q9GZN8 174 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 PRDM12Q9H4Q4 367 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 MAGEC1O60732 1142 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 SERPINA6P08185 405 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 ITGA2BP08514 1039 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 ATP6V1C1P21283 382 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 GARSP41250 739 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 GTF2A2P52657 109 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 ALDH18A1P54886 795 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 PDE1CQ14123 709 aaPredicted RBP18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 MUM1Q2TAK8 710 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 C16orf46Q6P387 395 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 RFX8Q6ZV50 586 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 PID1Q7Z2X4 250 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 OSTM1Q86WC4 334 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 RASSF3Q86WH2 238 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 TREML1Q86YW5 311 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 ZNF567Q8N184 647 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 KCTD13Q8WZ19 329 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 WNT8BQ93098 351 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 MED10Q9BTT4 135 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 TMPRSS4Q9NRS4 437 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 SYBUQ9NX95 663 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 IGSF9Q9P2J2 1179 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 SLC17A6Q9P2U8 582 aa18.43■□□□□ 0.54
CCHCR1-228ENST00000509552 CLDN5O00501 218 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 ADCY6O43306 1168 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 PSMG1O95456 288 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 PTPN1P18031 435 aaKnown RBP18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 VHLP40337 213 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 SESN3P58005 492 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 PITX1P78337 314 aaPredicted RBP18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 OTUD1Q5VV17 481 aaPredicted RBP18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 C9orf131Q5VYM1 1079 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 MBLAC2Q68D91 279 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 PLEKHH3Q7Z736 793 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 LMNTD2Q8IXW0 634 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 NETO2Q8NC67 525 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 PIWIL2Q8TC59 973 aaKnown RBP18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 TMEM40Q8WWA1 233 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 DNAJC9Q8WXX5 260 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 SORCS3Q9UPU3 1222 aa18.42■□□□□ 0.54
CCHCR1-228ENST00000509552 PLIN3O60664 434 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 GCKP35557 465 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 RAP1GDS1P52306 607 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 RPL10AP62906 217 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 KDSRQ06136 332 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 INSCQ1MX18 579 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 DNAL1Q4LDG9 190 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 SPANXN3Q5MJ09 141 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 BNIPLQ7Z465 357 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 CCDC106Q9BWC9 280 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 STN1Q9H668 368 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 KLHL8Q9P2G9 620 aaPredicted RBP18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 EMCNQ9ULC0 261 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 PDCD11Q14690 1871 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 CAPN9O14815 690 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 KRT36O76013 467 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 SLC1A6P48664 564 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 NDUFV1P49821 464 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 SLC34A1Q06495 639 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 DPYSQ14117 519 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 MFSD10Q14728 455 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 ZRSR2Q15696 482 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 MDH1BQ5I0G3 518 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 UBXN11Q5T124 520 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 C6orf163Q5TEZ5 329 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 PPP4R1Q8TF05 950 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 MS4A4AQ96JQ5 239 aa18.41■□□□□ 0.54
CCHCR1-228ENST00000509552 FAM161BQ96MY7 647 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms