RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TRIP4Q15650 581 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 CCDC6Q16204 474 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 RSPO4Q2I0M5 234 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 MPPE1Q53F39 396 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 EGFLAMQ63HQ2 1017 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 NUGGCQ68CJ6 796 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 OR6B2Q6IFH4 312 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 ACAD10Q6JQN1 1059 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 TMEM92Q6UXU6 159 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC26A9Q7LBE3 791 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 C11orf74Q86VG3 221 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 CCDC117Q8IWD4 279 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 MCOLN2Q8IZK6 566 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 DEFB106AQ8N104 65 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 PHTF2Q8N3S3 785 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 ARFGAP1Q8N6T3 406 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 C12orf50Q8NA57 414 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 SPC24Q8NBT2 197 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 ZNF397Q8NF99 534 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 MDGA1Q8NFP4 955 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 UCMAQ8WVF2 138 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 TMA16Q96EY4 203 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 LOXL4Q96JB6 756 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 FCRL2Q96LA5 508 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 CIPCQ9C0C6 399 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 ISCUQ9H1K1 167 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 GRPEL1Q9HAV7 217 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 METTL5Q9NRN9 209 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 SEMA4GQ9NTN9 838 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 SPTLC3Q9NUV7 552 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 ADAMTS1Q9UHI8 967 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 CDV3Q9UKY7 258 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 CEP83Q9Y592 693 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.08□□□□□ -0.963e-6■■□□□ 11.9
PDLIM5-213ENST00000509357 MUC22E2RYF6 1773 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 DOCK4Q8N1I0 1966 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 OTOGLQ3ZCN5 2332 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 ATG2BQ96BY7 2078 aa9.08□□□□□ -0.96
PDLIM5-213ENST00000509357 TYW5A2RUC4 315 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 PRRT4C9JH25 899 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 AKR1B15C9JRZ8 316 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 FOXD2O60548 495 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 LRP3O75074 770 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 ADAM23O75077 832 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 DAB1O75553 588 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 MOCS2O96007 188 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 PENKP01210 267 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 IRAK1P51617 712 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 PUM1Q14671 1186 aaKnown RBP eCLIP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 STARD3Q14849 445 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 E2F5Q15329 346 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 CSRP2Q16527 193 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 C15orf59Q2T9L4 293 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 PLK5Q496M5 336 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 AASDHQ4L235 1098 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 ADGRF1Q5T601 910 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 DAB2IPQ5VWQ8 1189 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 FYB2Q5VWT5 728 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 NADSYN1Q6IA69 706 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 RAD9BQ6WBX8 426 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 DGLUCYQ7Z3D6 616 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 ANKS1BQ7Z6G8 1248 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 RASSF3Q86WH2 238 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 ERICH1Q86X53 443 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 CPXM2Q8N436 756 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 OR8K1Q8NGG5 319 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 RLN3Q8WXF3 142 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 RNF34Q969K3 372 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 NT5C3BQ969T7 300 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 RMDN1Q96DB5 314 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 C18orf8Q96DM3 657 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 SERPINB11Q96P15 392 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 TBCBQ99426 244 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 NPY6RQ99463 290 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 DDX50Q9BQ39 737 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 PARD6AQ9NPB6 346 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 CACNA2D2Q9NY47 1150 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 CLEC4EQ9ULY5 219 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 STARD13Q9Y3M8 1113 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 SNX10Q9Y5X0 201 aa9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.07□□□□□ -0.96
PDLIM5-213ENST00000509357 SYNJ2BP-COX16A0A087WUM0 186 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 GOLGA6L7A0A1B0GV03 622 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 RCCD1A6NED2 376 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 SOWAHDA6NJG2 315 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 C2CD4BA6NLJ0 364 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 IRAK2O43187 625 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 SYNCRIPO60506 623 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 TBL1XO60907 577 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 EPN2O95208 641 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 LATS1O95835 1130 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 APOEP02649 317 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 FTLP02792 175 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 CISD3P0C7P0 127 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 HNRNPLP14866 589 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 TCF4P15884 667 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 TNFAIP3P21580 790 aa9.06□□□□□ -0.96
PDLIM5-213ENST00000509357 SLC6A4P31645 630 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms