RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CD70P32970 193 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 IL12RB1P42701 662 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 PTP4A2Q12974 167 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 NME3Q13232 169 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 MAP7D1Q3KQU3 841 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 ZSCAN23Q3MJ62 389 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 FSCBQ5H9T9 825 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 RAP1GAP2Q684P5 730 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 TRNP1Q6NT89 227 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 LUZP1Q86V48 1076 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 LGI2Q8N0V4 545 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 FRMD1Q8N878 549 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 HJURPQ8NCD3 748 aaPredicted RBP16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 HMGB4Q8WW32 186 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 RNF34Q969K3 372 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 PGAP3Q96FM1 320 aaPredicted RBP16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 PRICKLE1Q96MT3 831 aaPredicted RBP16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 TPSD1Q9BZJ3 242 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 PARD6AQ9NPB6 346 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 ANLNQ9NQW6 1124 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 ABCB8Q9NUT2 735 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 COX16Q9P0S2 106 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 MYO6Q9UM54 1294 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 RAD54BQ9Y620 910 aa16.71■□□□□ 0.27
PDLIM5-212ENST00000509333 GOLGA8SH3BPF8 625 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 ENDOD1O94919 500 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 ADCY5O95622 1261 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 F9P00740 461 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 PABPC1P11940 636 aaKnown RBP16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 FERP16591 822 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 ABCB4P21439 1286 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 FLT3P36888 993 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 P2RY2P41231 377 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 ZNF234Q14588 700 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 E2F5Q15329 346 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 PTPRNQ16849 979 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 CLEC16AQ2KHT3 1053 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 SLC25A52Q3SY17 297 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 FAM102AQ5T9C2 384 aaPredicted RBP16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 MBLAC2Q68D91 279 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 FBXL22Q6P050 247 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 CHST9Q7L1S5 443 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 BNIPLQ7Z465 357 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 PHLDB2Q86SQ0 1253 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 KIAA2013Q8IYS2 634 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 PGBD3Q8N328 593 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 GPR161Q8N6U8 529 aaKnown RBP16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 MSANTD4Q8NCY6 345 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 WFIKKN2Q8TEU8 576 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 RLN3Q8WXF3 142 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 TTC17Q96AE7 1141 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 EDEM3Q9BZQ6 932 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 PIGVQ9NUD9 493 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 TMEM51Q9NW97 253 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 GGA2Q9UJY4 613 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 GMEB2Q9UKD1 530 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 INTS6Q9UL03 887 aaKnown RBP16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 SPAG17Q6Q759 2223 aa16.7■□□□□ 0.26
PDLIM5-212ENST00000509333 EML5Q05BV3 1969 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 I6L893 689 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 PAGE1O75459 146 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 SERPINC1P01008 464 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 FANCCQ00597 558 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 SPEM2Q0P670 501 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 LMAN2Q12907 356 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 MTA1Q13330 715 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 AUHQ13825 339 aaKnown RBP16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 C5orf22Q49AR2 442 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 C14orf80Q86SX3 495 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 PHF13Q86YI8 300 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 CARNMT1Q8N4J0 409 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 ZNF557Q8N988 423 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 IGSF8Q969P0 613 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 ERLEC1Q96DZ1 483 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 TBCBQ99426 244 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 HINFPQ9BQA5 517 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 SYT11Q9BT88 431 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 CIPCQ9C0C6 399 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 WDCPQ9H6R7 721 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 ARHGEF38Q9NXL2 777 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 AIPL1Q9NZN9 384 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 MBD1Q9UIS9 605 aaPredicted RBP16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 STAP1Q9ULZ2 295 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 PLA2G4CQ9UP65 541 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 HS3ST4Q9Y661 456 aa16.69■□□□□ 0.26
PDLIM5-212ENST00000509333 ZBTB24O43167 697 aaPredicted RBP16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 LRP3O75074 770 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 RHOBTB1O94844 696 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 LUC7L3O95232 432 aaKnown RBP16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 DLDP09622 509 aaKnown RBP16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 CCDC172P0C7W6 258 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 BCKDHBP21953 392 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 CENPCQ03188 943 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 BYSLQ13895 437 aaKnown RBP16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 FUT11Q495W5 492 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 ARTNQ5T4W7 220 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 METTL3Q86U44 580 aaKnown RBP16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 CHSY1Q86X52 802 aa16.68■□□□□ 0.26
PDLIM5-212ENST00000509333 MFN1Q8IWA4 741 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms