RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 HAUS1Q96CS2 278 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 PRMT1Q99873 361 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 S1PR5Q9H228 398 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 CFAP97Q9P2B7 532 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 VANGL2Q9ULK5 521 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 NEU3Q9UQ49 428 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 CCL26Q9Y258 94 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 HELZP42694 1942 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 GREM1O60565 184 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 LTBRP36941 435 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 HCAR3P49019 387 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 COL19A1Q14993 1142 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 FAM133BQ5BKY9 247 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 ATAT1Q5SQI0 421 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 ACBD5Q5T8D3 534 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 SLC9A4Q6AI14 798 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 Q7L0L9 218 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 CHSY1Q86X52 802 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 PLD5Q8N7P1 536 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 PRELID2Q8N945 189 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 USP13Q92995 863 aaPredicted RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 AZIN2Q96A70 460 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 TBC1D31Q96DN5 1066 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 PABPC5Q96DU9 382 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 DCLK3Q9C098 648 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 TDP1Q9NUW8 608 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 LSM7Q9UK45 103 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 R3HDM2Q9Y2K5 976 aaKnown RBP15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 SH3BP1Q9Y3L3 701 aa15.31■□□□□ 0.04
SNCAIP-211ENST00000509023 XIRP2A4UGR9 3374 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 PRAMEF12O95522 483 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 ERCC2P18074 760 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 TACR2P21452 398 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 SLC6A4P31645 630 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 HTR7P34969 479 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 ARTNQ5T4W7 220 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 NCBP2-AS2Q69YL0 99 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 FBXL22Q6P050 247 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 LRRC31Q6UY01 552 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 DDX42Q86XP3 938 aaKnown RBP eCLIP15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 NPAS3Q8IXF0 933 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 ZNF683Q8IZ20 524 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 ZSCAN18Q8TBC5 510 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 SH3RF2Q8TEC5 729 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 RPGRIP1Q96KN7 1286 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 FAM118BQ9BPY3 351 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 ETNK2Q9NVF9 386 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 STIM2Q9P246 746 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 SAE1Q9UBE0 346 aaPredicted RBP15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 MFHAS1Q9Y4C4 1052 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 EYSQ5T1H1 3165 aa15.3■□□□□ 0.04
SNCAIP-211ENST00000509023 F5H5T6 163 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 APOC4-APOC2K7ER74 178 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 DCLK1O15075 740 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 LATS1O95835 1130 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 APOC2P02655 101 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 ZFXP17010 805 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 HOXC13P31276 330 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 RFWD3Q6PCD5 774 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 Q6ZNB5 142 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 ARID3BQ8IVW6 561 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 C1orf54Q8WWF1 131 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 MYLIPQ8WY64 445 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 ATG4AQ8WYN0 398 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 FGF13Q92913 245 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 MSLNLQ96KJ4 702 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 CCDC188H7C350 402 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 PECAM1P16284 738 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 TGM2P21980 687 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 ADGRF1Q5T601 910 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 C1orf228Q6PIY5 440 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 NPNTQ6UXI9 565 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 HTR3DQ70Z44 454 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 KLHL7Q8IXQ5 586 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 LGI2Q8N0V4 545 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 RIN3Q8TB24 985 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 P3H4Q92791 437 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 IGSF8Q969P0 613 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 MYEOVQ96EZ4 313 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 RPRD1AQ96P16 312 aaPredicted RBP15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 CATSPERBQ9H7T0 1116 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 MPP6Q9NZW5 540 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 PPARGC1AQ9UBK2 798 aaKnown RBP15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 STOML2Q9UJZ1 356 aa15.29■□□□□ 0.04
SNCAIP-211ENST00000509023 IGLV3-10A0A075B6K4 115 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 FGF10O15520 208 aaPredicted RBP15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 PHF2O75151 1096 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 IRAK1P51617 712 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 OTUD4Q01804 1114 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 CYP1B1Q16678 543 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 TMCO3Q6UWJ1 677 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 C12orf50Q8NA57 414 aaPredicted RBP15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 TTC13Q8NBP0 860 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 ACTL9Q8TC94 416 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 MAGOHBQ96A72 148 aaKnown RBP15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 RIPOR3Q96MK2 946 aa15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 CDX2Q99626 313 aaPredicted RBP15.28■□□□□ 0.04
SNCAIP-211ENST00000509023 DDX50Q9BQ39 737 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms