RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 GPR15P49685 360 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 PGFP49763 221 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 ARPP19P56211 112 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 ARL4CP56559 192 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 IFRD2Q12894 506 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 CBLBQ13191 982 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 STAT4Q14765 748 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 PDK1Q15118 436 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 HIF1AQ16665 826 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 RTP2Q5QGT7 225 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 FAM72AQ5TYM5 149 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 SDHAF4Q5VUM1 108 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 FAM72DQ6L9T8 149 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 MFSD5Q6N075 450 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 KDM7AQ6ZMT4 941 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 ANKS3Q6ZW76 656 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 CENPUQ71F23 418 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 TMEM173Q86WV6 379 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 FAM72BQ86X60 149 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 ARHGAP18Q8N392 663 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 TAB3Q8N5C8 712 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 C2orf15Q8WU43 125 aaKnown RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 LRRN4Q8WUT4 740 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 BCL7CQ8WUZ0 217 aaPredicted RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 TFB1MQ8WVM0 346 aaKnown RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 RNF34Q969K3 372 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 TLCD1Q96CP7 247 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 C9orf72Q96LT7 481 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 SERPINB12Q96P63 405 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 PGLYRP2Q96PD5 576 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 SMOC2Q9H3U7 446 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 CWH43Q9H720 699 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 NMUR1Q9HB89 426 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 RAB6BQ9NRW1 208 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 COMMD8Q9NX08 183 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 ARHGEF38Q9NXL2 777 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 XPO7Q9UIA9 1087 aaKnown RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 TSR3Q9UJK0 312 aaKnown RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 NOVA2Q9UNW9 492 aaKnown RBP8.21□□□□□ -1.1
NR1I3-226ENST00000508740 SLC27A5Q9Y2P5 690 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 RAD54BQ9Y620 910 aa8.21□□□□□ -1.1
NR1I3-226ENST00000508740 A0A087WUV0 522 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 ABHD14A-ACY1A0A1B0GW23 586 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 FAM92AA1XBS5 289 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 MTMR11A4FU01 709 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 A6NNZ2 444 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 KCNU1A8MYU2 1149 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 E7ESA3 106 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TNFRSF10AO00220 468 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 RGS16O15492 202 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 IRAK2O43187 625 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 MFSD11O43934 449 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 ZNF189O75820 626 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TMEM63AO94886 807 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 RTN3O95197 1032 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 VNN2O95498 520 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 AGTP01019 485 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TIMP1P01033 207 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 HAPLN1P10915 354 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 CPB1P15086 417 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 VAV1P15498 845 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 ERCC2P18074 760 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 YWHAQP27348 245 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 CCR1P32246 355 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 PBX3P40426 434 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 MAGEA6P43360 314 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 SLCO1A2P46721 670 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 LMAN1P49257 510 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 GLUD2P49448 558 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TPI1P60174 286 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 MAGOHP61326 146 aaKnown RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 BASP1P80723 227 aaKnown RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 GAD2Q05329 585 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 PDIA2Q13087 525 aaKnown RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 DUSP4Q13115 394 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 AUHQ13825 339 aaKnown RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 KCNJ11Q14654 390 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 PPP2R5DQ14738 602 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 PRKD1Q15139 912 aaPredicted RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 USP41Q3LFD5 358 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TUBB8Q3ZCM7 444 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 DNAJC21Q5F1R6 531 aaKnown RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TNFAIP8L3Q5GJ75 292 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 BRMS1LQ5PSV4 323 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 FNBP1LQ5T0N5 605 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 HEATR6Q6AI08 1181 aaKnown RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 MSANTD2Q6P1R3 559 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 PPP1R21Q6ZMI0 780 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 RNF19BQ6ZMZ0 732 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 DENND5BQ6ZUT9 1274 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 ZBED8Q8IZ13 594 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 PDIK1LQ8N165 341 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 CCDC33Q8N5R6 958 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 ARFGAP2Q8N6H7 521 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 CCDC110Q8TBZ0 833 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 SPPL2BQ8TCT7 592 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 EPS8L3Q8TE67 593 aaKnown RBP8.2□□□□□ -1.1
NR1I3-226ENST00000508740 HTR3CQ8WXA8 447 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 CASP10Q92851 521 aa8.2□□□□□ -1.1
NR1I3-226ENST00000508740 TOP1MTQ969P6 601 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms