RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 FAM170AA1A519 330 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 TCAF2A6NFQ2 919 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 MYO1FO00160 1098 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 TBL1XO60907 577 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 PAGE1O75459 146 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 MOCS3O95396 460 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 CYP1A2P05177 515 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 DCNP07585 359 aaKnown RBP9.45□□□□□ -0.9
NUP54-207ENST00000508583 TMEM253P0C7T8 217 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 CHRNB1P11230 501 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 TACR2P21452 398 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 HOXD9P28356 352 aaPredicted RBP9.45□□□□□ -0.9
NUP54-207ENST00000508583 HTR7P34969 479 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 OPRD1P41143 372 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 ZNF135P52742 658 aaPredicted RBP9.45□□□□□ -0.9
NUP54-207ENST00000508583 RPL7AP62424 266 aaKnown RBP9.45□□□□□ -0.9
NUP54-207ENST00000508583 PITX1P78337 314 aaPredicted RBP9.45□□□□□ -0.9
NUP54-207ENST00000508583 MRPS21P82921 87 aaKnown RBP9.45□□□□□ -0.9
NUP54-207ENST00000508583 ASTE1Q2TB18 679 aaPredicted RBP9.45□□□□□ -0.9
NUP54-207ENST00000508583 RAP1GAP2Q684P5 730 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 NADSYN1Q6IA69 706 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 SDE2Q6IQ49 451 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 FSTL4Q6MZW2 842 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 TXNDC11Q6PKC3 985 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 SLFN11Q7Z7L1 901 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 PHLDB2Q86SQ0 1253 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 FAM131BQ86XD5 332 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 PSTKQ8IV42 348 aaKnown RBP9.45□□□□□ -0.9
NUP54-207ENST00000508583 MFN1Q8IWA4 741 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 RHOT2Q8IXI1 618 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 LGI2Q8N0V4 545 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 AHI1Q8N157 1196 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 SPEM1Q8N4L4 309 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 NAT16Q8N8M0 369 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 CCDC112Q8NEF3 446 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 JOSD2Q8TAC2 188 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 OLIG1Q8TAK6 271 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 BHMTQ93088 406 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 CHFRQ96EP1 664 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 PHF12Q96QT6 1004 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 NUP85Q9BW27 656 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 THAP2Q9H0W7 228 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 IP6K2Q9UHH9 426 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 FBXO10Q9UK96 956 aa9.45□□□□□ -0.9
NUP54-207ENST00000508583 TMEM191CA6NGB0 347 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 H0Y626 953 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 GFRA2O00451 464 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 CCP110O43303 1012 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 ATMINO43313 823 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 LAMTOR5O43504 91 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 PRPSAP2O60256 369 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 TSPAN3O60637 253 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 CLDN11O75508 207 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 LUC7L3O95232 432 aaKnown RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 EGFP01133 1207 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 ATP5BP06576 529 aaKnown RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 SLC6A4P31645 630 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 PCK1P35558 622 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 GALCP54803 685 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 NRLP54845 237 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 CDH4P55283 916 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 HDAC4P56524 1084 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 NRG1Q02297 640 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 KDSRQ06136 332 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 SCAPQ12770 1279 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 SLC12A1Q13621 1099 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 AUHQ13825 339 aaKnown RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 DMC1Q14565 340 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 C15orf59Q2T9L4 293 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 GAB4Q2WGN9 574 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 EOGTQ5NDL2 527 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 OTUD1Q5VV17 481 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 TRNP1Q6NT89 227 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 SCYL2Q6P3W7 929 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 RFWD3Q6PCD5 774 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 CHST9Q7L1S5 443 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 C12orf40Q86WS4 652 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 ZNF687Q8N1G0 1237 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 NIPA2Q8N8Q9 360 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 TMEM105Q8N8V8 129 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 DTWD2Q8NBA8 298 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 SPC24Q8NBT2 197 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 FIBINQ8TAL6 211 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 ZNF564Q8TBZ8 553 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 CHP1Q99653 195 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 EPAS1Q99814 870 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 PRMT1Q99873 361 aaKnown RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 BAG1Q99933 345 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 SIK2Q9H0K1 926 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 OSBPL2Q9H1P3 480 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 GRPEL1Q9HAV7 217 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 SPATA6Q9NWH7 488 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 PLK2Q9NYY3 685 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 KIAA1522Q9P206 1035 aaPredicted RBP9.44□□□□□ -0.9
NUP54-207ENST00000508583 CTTNBP2NLQ9P2B4 639 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 ANAPC7Q9UJX3 599 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 STARD13Q9Y3M8 1113 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 HS3ST4Q9Y661 456 aa9.44□□□□□ -0.9
NUP54-207ENST00000508583 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms