RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 ZSWIM3Q96MP5 696 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 DDX50Q9BQ39 737 aaKnown RBP18.03■□□□□ 0.48
RNF4-209ENST00000507784 ADAM7Q9H2U9 754 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 ZMYM5Q9UJ78 669 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 ARHGAP26Q9UNA1 814 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 R3HDM2Q9Y2K5 976 aaKnown RBP18.03■□□□□ 0.48
RNF4-209ENST00000507784 CHD7Q9P2D1 2997 aa18.03■□□□□ 0.48
RNF4-209ENST00000507784 LAMA2P24043 3122 aaKnown RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 F5H5T6 163 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 CCDC188H7C350 402 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 TRDMT1O14717 391 aaKnown RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 TSPAN3O60637 253 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 TBX10O75333 385 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 ERCC2P18074 760 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 ZXDBP98169 803 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 NRG1Q02297 640 aaPredicted RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 ITIH3Q06033 890 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 KLF1Q13351 362 aaPredicted RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 SIX1Q15475 284 aaPredicted RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 ACBD5Q5T8D3 534 aaPredicted RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 FBXL22Q6P050 247 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 ZNF572Q7Z3I7 529 aaPredicted RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 ZDHHC14Q8IZN3 488 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 PRELID2Q8N945 189 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 TTC13Q8NBP0 860 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 ADAMTS19Q8TE59 1207 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 MYLIPQ8WY64 445 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 P3H4Q92791 437 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 RPRD1AQ96P16 312 aaPredicted RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 KRT12Q99456 494 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 CATSPERBQ9H7T0 1116 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 ARHGEF4Q9NR80 690 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 TDP1Q9NUW8 608 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 ETNK2Q9NVF9 386 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 SAE1Q9UBE0 346 aaPredicted RBP18.02■□□□□ 0.48
RNF4-209ENST00000507784 HEY1Q9Y5J3 304 aa18.02■□□□□ 0.48
RNF4-209ENST00000507784 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.47
RNF4-209ENST00000507784 PHF2O75151 1096 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 TGM2P21980 687 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 SLC6A4P31645 630 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 HTR7P34969 479 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 OTUD4Q01804 1114 aaKnown RBP18.01■□□□□ 0.47
RNF4-209ENST00000507784 DPYSQ14117 519 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 CCDC85BQ15834 202 aaPredicted RBP18.01■□□□□ 0.47
RNF4-209ENST00000507784 CTC1Q2NKJ3 1217 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 TEX35Q5T0J7 233 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 SLC9A4Q6AI14 798 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 RFWD3Q6PCD5 774 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 TMCO3Q6UWJ1 677 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 ARID3BQ8IVW6 561 aaPredicted RBP18.01■□□□□ 0.47
RNF4-209ENST00000507784 PLD5Q8N7P1 536 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 ZSCAN18Q8TBC5 510 aaPredicted RBP18.01■□□□□ 0.47
RNF4-209ENST00000507784 ATG4AQ8WYN0 398 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 USP13Q92995 863 aaPredicted RBP18.01■□□□□ 0.47
RNF4-209ENST00000507784 PABPC5Q96DU9 382 aaKnown RBP18.01■□□□□ 0.47
RNF4-209ENST00000507784 RIPOR3Q96MK2 946 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 PRMT1Q99873 361 aaKnown RBP18.01■□□□□ 0.47
RNF4-209ENST00000507784 DDX47Q9H0S4 455 aaKnown RBP18.01■□□□□ 0.47
RNF4-209ENST00000507784 S1PR5Q9H228 398 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 PRDM16Q9HAZ2 1276 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 HOMER3Q9NSC5 361 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 MPP6Q9NZW5 540 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 CCL26Q9Y258 94 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 ZNF510Q9Y2H8 683 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 MFHAS1Q9Y4C4 1052 aa18.01■□□□□ 0.47
RNF4-209ENST00000507784 APOC4-APOC2K7ER74 178 aa18■□□□□ 0.47
RNF4-209ENST00000507784 APOC2P02655 101 aa18■□□□□ 0.47
RNF4-209ENST00000507784 PECAM1P16284 738 aaPredicted RBP18■□□□□ 0.47
RNF4-209ENST00000507784 CCNG2Q16589 344 aa18■□□□□ 0.47
RNF4-209ENST00000507784 ADGRF1Q5T601 910 aa18■□□□□ 0.47
RNF4-209ENST00000507784 NCBP2-AS2Q69YL0 99 aa18■□□□□ 0.47
RNF4-209ENST00000507784 POTEHQ6S545 545 aa18■□□□□ 0.47
RNF4-209ENST00000507784 HTR3DQ70Z44 454 aa18■□□□□ 0.47
RNF4-209ENST00000507784 Q7L0L9 218 aa18■□□□□ 0.47
RNF4-209ENST00000507784 CFAP52Q8N1V2 620 aa18■□□□□ 0.47
RNF4-209ENST00000507784 ACTL9Q8TC94 416 aa18■□□□□ 0.47
RNF4-209ENST00000507784 PPM1EQ8WY54 764 aa18■□□□□ 0.47
RNF4-209ENST00000507784 IGSF8Q969P0 613 aa18■□□□□ 0.47
RNF4-209ENST00000507784 ZYG11BQ9C0D3 744 aa18■□□□□ 0.47
RNF4-209ENST00000507784 NUP210Q8TEM1 1887 aaPredicted RBP17.99■□□□□ 0.47
RNF4-209ENST00000507784 H7C0C1 242 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 DCLK1O15075 740 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 FGF10O15520 208 aaPredicted RBP17.99■□□□□ 0.47
RNF4-209ENST00000507784 MAP3K6O95382 1288 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 PRAMEF12O95522 483 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 LATS1O95835 1130 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 CHRNA3P32297 505 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 LTBRP36941 435 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 COILP38432 576 aaPredicted RBP17.99■□□□□ 0.47
RNF4-209ENST00000507784 MTHFRP42898 656 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 ATP5OP48047 213 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 KCNJ1P48048 391 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 EIF3EP60228 445 aaKnown RBP17.99■□□□□ 0.47
RNF4-209ENST00000507784 SKIV2LQ15477 1246 aaKnown RBP17.99■□□□□ 0.47
RNF4-209ENST00000507784 FAM133BQ5BKY9 247 aaKnown RBP17.99■□□□□ 0.47
RNF4-209ENST00000507784 RABGAP1LQ5R372 815 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 MANEALQ5VSG8 457 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 Q6ZNB5 142 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 NPAS3Q8IXF0 933 aa17.99■□□□□ 0.47
RNF4-209ENST00000507784 CCDC105Q8IYK2 499 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms