RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ERMARDQ5T6L9 678 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 RHBDF2Q6PJF5 856 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 KIAA0907Q7Z7F0 614 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 TMEM139Q8IV31 216 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 DENND1CQ8IV53 801 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 BBS7Q8IWZ6 715 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 FAM71BQ8TC56 605 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 FAM172AQ8WUF8 416 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 FAM3CQ92520 227 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 CD101Q93033 1021 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 RSPRY1Q96DX4 576 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PIWIL1Q96J94 861 aaKnown RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 CFAP57Q96MR6 1250 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 LRRC3BQ96PB8 259 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PNKPQ96T60 521 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 P2RY13Q9BPV8 354 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 BBS2Q9BXC9 721 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PLA2G2FQ9BZM2 168 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 TKTL2Q9H0I9 626 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 THAP2Q9H0W7 228 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 ZWILCHQ9H900 591 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PIGVQ9NUD9 493 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 HAUS2Q9NVX0 235 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 SMPD4Q9NXE4 827 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 DDX56Q9NY93 547 aaKnown RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 TAS2R14Q9NYV8 317 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 KIAA1522Q9P206 1035 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-205ENST00000506880 CTTNBP2NLQ9P2B4 639 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 MUTYHQ9UIF7 546 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 ANAPC7Q9UJX3 599 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 EFR3BQ9Y2G0 817 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 TBC1D30Q9Y2I9 924 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 PCDHA13Q9Y5I0 950 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 RAD54BQ9Y620 910 aa8.75□□□□□ -1.01
PDGFC-205ENST00000506880 ILVBLA1L0T0 632 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 TMEM221A6NGB7 291 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 MIF4GDA9UHW6 222 aaKnown RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 M0R296 226 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 NRG2O14511 850 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 PSTPIP1O43586 416 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 ATP5BP06576 529 aaKnown RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 TYRP14679 529 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 HNRNPLP14866 589 aaKnown RBP eCLIP8.74□□□□□ -1.013e-16■■■■■ 28.1
PDGFC-205ENST00000506880 RHOQP17081 205 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 AOC1P19801 751 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 TACR2P21452 398 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 RNASE9P60153 205 aaKnown RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 RPL7AP62424 266 aaKnown RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF33AQ06730 810 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 NME3Q13232 169 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 CCINQ13939 588 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 GRM2Q14416 872 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 TAF5Q15542 800 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 DPYSL2Q16555 572 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 ZC3H12AQ5D1E8 599 aaKnown RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 LY6G5CQ5SRR4 150 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 C6orf118Q5T5N4 469 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 MANEALQ5VSG8 457 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 OTUD1Q5VV17 481 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 FYB2Q5VWT5 728 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 ASTLQ6HA08 431 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 GRAMD4Q6IC98 578 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 ANKS1BQ7Z6G8 1248 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 CHSY1Q86X52 802 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 AHI1Q8N157 1196 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 FBXL6Q8N531 539 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 TERB1Q8NA31 727 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 PJA1Q8NG27 643 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 SLC35G2Q8TBE7 412 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 CASKIN2Q8WXE0 1202 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 NDRG1Q92597 394 aaKnown RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 FATE1Q969F0 183 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 RPP25Q9BUL9 199 aaKnown RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 COL25A1Q9BXS0 654 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-205ENST00000506880 CHRDQ9H2X0 955 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 MFSD1Q9H3U5 465 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 EBF3Q9H4W6 596 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 LTB4R2Q9NPC1 389 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 CD320Q9NPF0 282 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 STIM2Q9P246 746 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 OR12D3Q9UGF7 316 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 USP18Q9UMW8 372 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 WNT6Q9Y6F9 365 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 CKAP5Q14008 2032 aa8.74□□□□□ -1.01
PDGFC-205ENST00000506880 NUP205Q92621 2012 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 CCDC66A2RUB6 948 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 TMCO5BA8MYB1 307 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 PIK3R2O00459 728 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZSCAN12O43309 604 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 MSI1O43347 362 aaKnown RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 LRCH4O75427 683 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 PAGE1O75459 146 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 GRAP2O75791 330 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 SRPRAP08240 638 aaKnown RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ZFXP17010 805 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 HOXD9P28356 352 aaPredicted RBP8.73□□□□□ -1.01
PDGFC-205ENST00000506880 SERPINB6P35237 376 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 ARL4AP40617 200 aa8.73□□□□□ -1.01
PDGFC-205ENST00000506880 CETN2P41208 172 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms