RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SPEM1Q8N4L4 309 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 ZNF557Q8N988 423 aaPredicted RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 PLPP7Q8NBV4 271 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 ATOH1Q92858 354 aaPredicted RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 BHMTQ93088 406 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 PGAP3Q96FM1 320 aaPredicted RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 SLC39A13Q96H72 371 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 PIWIL1Q96J94 861 aaKnown RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 FCRL2Q96LA5 508 aaPredicted RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 NPY6RQ99463 290 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 C11orf70Q9BRQ4 267 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.54□□□□□ -1.2
GYPB-206ENST00000506516 SELENOOQ9BVL4 669 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 SLC2A11Q9BYW1 496 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 TRIM5Q9C035 493 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 WDCPQ9H6R7 721 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 RBM12Q9NTZ6 932 aaKnown RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 DNAJC17Q9NVM6 304 aaKnown RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 ZNHIT6Q9NWK9 470 aaKnown RBP7.54□□□□□ -1.2
GYPB-206ENST00000506516 PLK2Q9NYY3 685 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 COX16Q9P0S2 106 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 TMEM59LQ9UK28 342 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 FBXO4Q9UKT5 387 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 MAP4K5Q9Y4K4 846 aa7.54□□□□□ -1.2
GYPB-206ENST00000506516 OBSL1O75147 1896 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 ZNF638Q14966 1978 aaKnown RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 TECTAO75443 2155 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 PATJQ8NI35 1801 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 DENND4CQ5VZ89 1909 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 ANAPC1Q9H1A4 1944 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 FAM170AA1A519 330 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 SIGLEC16A6NMB1 481 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 TMCO5BA8MYB1 307 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 KCNU1A8MYU2 1149 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 ESPNB1AK53 854 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 CHURC1-FNTBB4DL54 471 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 H0Y858 1186 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 K7EQS6 105 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 TIMM44O43615 452 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 TSPAN3O60637 253 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 RTN2O75298 545 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 MOCS2O96007 188 aaPredicted RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 PENKP01210 267 aaPredicted RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 FTLP02792 175 aaPredicted RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 GYPCP04921 128 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 SKILP12757 684 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 PDGFRAP16234 1089 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 SDC4P31431 198 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 CASP14P31944 242 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 SULT1E1P49888 294 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 NRLP54845 237 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 GSCP56915 257 aaPredicted RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 CSTF1Q05048 431 aaKnown RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 DEUP1Q05D60 604 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 EIF4EBP2Q13542 120 aaPredicted RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 GAB4Q2WGN9 574 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 MAP7D1Q3KQU3 841 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 HSF5Q4G112 596 aaPredicted RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 TDRD12Q587J7 1177 aaKnown RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 BRMS1LQ5PSV4 323 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 MPP7Q5T2T1 576 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 PIK3R6Q5UE93 754 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 FYB2Q5VWT5 728 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 SDE2Q6IQ49 451 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 DCUN1D2Q6PH85 259 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 SARM1Q6SZW1 724 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 TRMT11Q7Z4G4 463 aaKnown RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 PHLDB2Q86SQ0 1253 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 VSTM4Q8IW00 320 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 MCOLN2Q8IZK6 566 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 DEPDC4Q8N2C3 294 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 C3orf20Q8ND61 904 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 PRSS33Q8NF86 280 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 OR8K1Q8NGG5 319 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 RXFP2Q8WXD0 754 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 NT5C3BQ969T7 300 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 ACDQ96AP0 544 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 TRIM11Q96F44 468 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 KCTD15Q96SI1 283 aaPredicted RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 RBSNQ9H1K0 784 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 METTL5Q9NRN9 209 aaKnown RBP7.53□□□□□ -1.2
GYPB-206ENST00000506516 PARVAQ9NVD7 372 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 FBXO10Q9UK96 956 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 SLC8A2Q9UPR5 921 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 STARD13Q9Y3M8 1113 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 NCOR1O75376 2440 aa7.53□□□□□ -1.2
GYPB-206ENST00000506516 CUL9Q8IWT3 2517 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 GOLGA6L7A0A1B0GV03 622 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 F5H5T6 163 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 TBL1XO60907 577 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 CISD3P0C7P0 127 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 MYBL1P10243 752 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 TACR2P21452 398 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 GPD1P21695 349 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 RDXP35241 583 aaKnown RBP7.52□□□□□ -1.21
GYPB-206ENST00000506516 FLT3P36888 993 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 CXCR3P49682 368 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 SEC13P55735 322 aa7.52□□□□□ -1.21
GYPB-206ENST00000506516 PITX1P78337 314 aaPredicted RBP7.52□□□□□ -1.21
GYPB-206ENST00000506516 ATP11AP98196 1134 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms