RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 LSM14BQ9BX40 385 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 GANQ9H2C0 597 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 TMEM245Q9H330 911 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 ANLNQ9NQW6 1124 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 PILRBQ9UKJ0 227 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 NFE2L3Q9Y4A8 694 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 DOCK4Q8N1I0 1966 aa17.37■□□□□ 0.37
PDLIM7-215ENST00000506161 C4orf47A7E2U8 309 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 C1QTNF9BB2RNN3 333 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 I6L893 689 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 C1QTNF9P0C862 333 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 GGCXP38435 758 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 C2CD6Q53TS8 623 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 DCAF6Q58WW2 860 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 KLHDC7AQ5VTJ3 777 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 PEAR1Q5VY43 1037 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 RAP1GAP2Q684P5 730 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 NUGGCQ68CJ6 796 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 MBLAC2Q68D91 279 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 SDE2Q6IQ49 451 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 UNQ6494/PRO21346Q6UXR6 183 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 CIR1Q86X95 450 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 AZIN2Q96A70 460 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 PPP1R13BQ96KQ4 1090 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 SLC2A13Q96QE2 648 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 PRMT1Q99873 361 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 POPDC2Q9HBU9 364 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 USP36Q9P275 1121 aaKnown RBP17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 SLCO1B1Q9Y6L6 691 aa17.36■□□□□ 0.37
PDLIM7-215ENST00000506161 DOCK9Q9BZ29 2069 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 CNOT1A5YKK6 2376 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 SYNJ2BP-COX16A0A087WUM0 186 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 GIPC1O14908 333 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 EPHX1P07099 455 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 MAOBP27338 520 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 CTSOP43234 321 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 YWHAZP63104 245 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 NNTQ13423 1086 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 RAPGEF1Q13905 1077 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 EIF4HQ15056 248 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 TRIM61Q5EBN2 209 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 LYSMD4Q5XG99 296 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 TRNP1Q6NT89 227 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 BEND5Q7L4P6 421 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 NOP9Q86U38 636 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 C11orf74Q86VG3 221 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 UNC45BQ8IWX7 931 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 OR52K2Q8NGK3 314 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 OR2I1PQ8NGU4 316 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 GOLGA1Q92805 767 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 MRGPRX3Q96LB0 322 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 VPS16Q9H269 839 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 LHX5Q9H2C1 402 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 HSD3B7Q9H2F3 369 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 PRDM16Q9HAZ2 1276 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 COX16Q9P0S2 106 aa17.35■□□□□ 0.37
PDLIM7-215ENST00000506161 FRYQ5TBA9 3013 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 CAPN9O14815 690 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 KCNK5O95279 499 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 SLC11A2P49281 568 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 PTK2Q05397 1052 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 ZNF33AQ06730 810 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 KRT31Q15323 416 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 ARTNQ5T4W7 220 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 TAF3Q5VWG9 929 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 OR6B2Q6IFH4 312 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 SERPINA13PQ6UXR4 307 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 TMPRSS6Q8IU80 811 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 SYT12Q8IV01 421 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 MFN1Q8IWA4 741 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 FAM114A1Q8IWE2 563 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 APCDD1Q8J025 514 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 LGI2Q8N0V4 545 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 CARNMT1Q8N4J0 409 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 ENOX1Q8TC92 643 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 HSPA12BQ96MM6 686 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 ITM2CQ9NQX7 267 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 TMPRSS4Q9NRS4 437 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 FANCLQ9NW38 375 aa17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 WSB2Q9NYS7 404 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-215ENST00000506161 CEP295Q9C0D2 2601 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 KCNU1A8MYU2 1149 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 KHNYNO15037 678 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 MMEP08473 750 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 UCHL3P15374 230 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 CYP11B1P15538 503 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 TACR2P21452 398 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 CDH5P33151 784 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 TPMTP51580 245 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 ZNF445P59923 1031 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 CAMK2GQ13555 558 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 FNDC3BQ53EP0 1204 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 RAB6CQ53S08 254 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 MPP7Q5T2T1 576 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 C14orf80Q86SX3 495 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 AHI1Q8N157 1196 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 KDF1Q8NAX2 398 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 HJURPQ8NCD3 748 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 FIBINQ8TAL6 211 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 WFIKKN2Q8TEU8 576 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms