RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PEBP4Q96S96 227 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 NAA50Q9GZZ1 169 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 NOL11Q9H8H0 719 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 AGO4Q9HCK5 861 aaKnown RBP7.83□□□□□ -1.16
NEDD9-208ENST00000504387 RNF146Q9NTX7 359 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 DMTF1Q9Y222 760 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 CEPT1Q9Y6K0 416 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 SCN7AQ01118 1682 aa7.83□□□□□ -1.16
NEDD9-208ENST00000504387 ATAD5Q96QE3 1844 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 C7orf72A4D263 438 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 SLC15A5A6NIM6 579 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 TMEM233B4DJY2 109 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ENTPD3O75355 529 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ZBTB7AO95365 584 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 LTFP02788 710 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 JUNP05412 331 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 AOC1P19801 751 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 CAP2P40123 477 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 NUMBP49757 651 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 BCAR1P56945 870 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 IRF9Q00978 393 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 C1QBPQ07021 282 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 NME3Q13232 169 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 TUBB3Q13509 450 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 GRM2Q14416 872 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PIGHQ14442 188 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 POTEHQ6S545 545 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 NAPRTQ6XQN6 538 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 KYAT3Q6YP21 454 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 NCCRP1Q6ZVX7 275 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 TAS1R3Q7RTX0 852 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 KBTBD6Q86V97 674 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PHF13Q86YI8 300 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 OFCC1Q8IZS5 231 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 SYTL5Q8TDW5 730 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 SLC29A1Q99808 456 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 POPDC2Q9HBU9 364 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PSMD13Q9UNM6 376 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 AURKCQ9UQB9 309 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 TSC22D4Q9Y3Q8 395 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 A0A1W2PPW3 197 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 C3orf70A6NLC5 250 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 YDJCA8MPS7 323 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 CCNT2O60583 730 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 KCNH1O95259 989 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 DPP6P42658 865 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 EIF2B2P49770 351 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 GNA12Q03113 381 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 CEACAM7Q14002 265 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 CA9Q16790 459 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ANGEL2Q5VTE6 544 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 NUP93Q8N1F7 819 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ACTRT2Q8TDY3 377 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ABHD8Q96I13 439 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 SCYL1Q96KG9 808 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 KCNK16Q96T55 309 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 APBA2Q99767 749 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 OMDQ99983 421 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 IDI2Q9BXS1 227 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 RPAP3Q9H6T3 665 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PLAC1Q9HBJ0 212 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 SSU72Q9NP77 194 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PCDH12Q9NPG4 1184 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 HMGXB4Q9UGU5 601 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 RIPK3Q9Y572 518 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PLIN4Q96Q06 1357 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 RREB1Q92766 1687 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ZNFX1Q9P2E3 1918 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 RBM47A0AV96 593 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ATP9BO43861 1147 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 TIPRLO75663 272 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 FBXO21O94952 628 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ZBTB11O95625 1053 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ALDOAP04075 364 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 EDN1P05305 212 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 CALB1P05937 261 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 MAPTP10636 758 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PDGFRAP16234 1089 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 MGAT1P26572 445 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 MTTPP55157 894 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 SLC25A11Q02978 314 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 GBE1Q04446 702 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 WASHC5Q12768 1159 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ITGADQ13349 1161 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 MAP7D1Q3KQU3 841 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 DCAF6Q58WW2 860 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PERM1Q5SV97 790 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 MBLAC2Q68D91 279 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 PRR23BQ6ZRT6 265 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 BBS12Q6ZW61 710 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 FNDC8Q8TC99 324 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 RIT2Q99578 217 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 ADPGKQ9BRR6 497 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 HAUS8Q9BT25 410 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 MRPS26Q9BYN8 205 aaKnown RBP7.82□□□□□ -1.16
NEDD9-208ENST00000504387 BRD8Q9H0E9 1235 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 SACM1LQ9NTJ5 587 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 KCND2Q9NZV8 630 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 FEM1BQ9UK73 627 aa7.82□□□□□ -1.16
NEDD9-208ENST00000504387 EMCNQ9ULC0 261 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms