RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 GPATCH2LQ9NWQ4 482 aa10.31□□□□□ -0.76
C4A-258ENST00000496659 THG1LQ9NWX6 298 aaKnown RBP10.31□□□□□ -0.76
C4A-258ENST00000496659 CDC23Q9UJX2 597 aa10.31□□□□□ -0.76
C4A-258ENST00000496659 USP15Q9Y4E8 981 aaPredicted RBP10.31□□□□□ -0.76
C4A-258ENST00000496659 HS3ST4Q9Y661 456 aa10.31□□□□□ -0.76
C4A-258ENST00000496659 hCG_1818297A0A087WSY0 165 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 E9PAM4 449 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 PI4K2BG5E9Z4 385 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 APOL1O14791 398 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 ZNF189O75820 626 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 CYBBP04839 570 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 PYGMP11217 842 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 TACR2P21452 398 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 EPHB2P29323 1055 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 CXCR5P32302 372 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 CDKN2BP42772 138 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 IFNAR2P48551 515 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 MLLT6P55198 1093 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 ZNF211Q13398 564 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 ZNF77Q15935 545 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 LONRF2Q1L5Z9 754 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 ATP13A4Q4VNC1 1196 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 ADGRF1Q5T601 910 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 DCAF12L1Q5VU92 463 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 RAP1GAP2Q684P5 730 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 MFSD7Q6UXD7 560 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 RFX8Q6ZV50 586 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 BZW1Q7L1Q6 419 aaKnown RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 ARID3BQ8IVW6 561 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 YAF2Q8IY57 180 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 RASGEF1CQ8N431 466 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 ZNF557Q8N988 423 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 TDRD5Q8NAT2 981 aaKnown RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 TTC13Q8NBP0 860 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 ACTRT1Q8TDG2 376 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 SUSD6Q92537 303 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 RAPGEF5Q92565 580 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 USP13Q92995 863 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 ASB16Q96NS5 453 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 RPRD1AQ96P16 312 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 CSPG4P5Q96PW8 444 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 KCTD15Q96SI1 283 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 OSBPL8Q9BZF1 889 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 ZYG11BQ9C0D3 744 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 POMKQ9H5K3 350 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 TRPV4Q9HBA0 871 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 ZFP14Q9HCL3 533 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 C11orf16Q9NQ32 467 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 GKN1Q9NS71 199 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 HOMER3Q9NSC5 361 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 PPARGC1AQ9UBK2 798 aaKnown RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 STOML2Q9UJZ1 356 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 AGO1Q9UL18 857 aaKnown RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 TTC7AQ9ULT0 858 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 NR2E1Q9Y466 385 aa10.3□□□□□ -0.76
C4A-258ENST00000496659 NUP210Q8TEM1 1887 aaPredicted RBP10.3□□□□□ -0.76
C4A-258ENST00000496659 HELZP42694 1942 aaKnown RBP10.29□□□□□ -0.76
C4A-258ENST00000496659 FANCGO15287 622 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 SRGAP2O75044 1071 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 LRIG2O94898 1065 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 PRAMEF12O95522 483 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 FGGP02679 453 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 RHOQP17081 205 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 GOT1P17174 413 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 TGM2P21980 687 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 HOXC13P31276 330 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 ARSEP51690 589 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 SEMA3BQ13214 749 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 AUHQ13825 339 aaKnown RBP10.29□□□□□ -0.76
C4A-258ENST00000496659 TAZQ16635 292 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 CA9Q16790 459 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 ANKRD20A8PQ5CZ79 823 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 FAM78AQ5JUQ0 283 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 PIK3R6Q5UE93 754 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 KAZNQ674X7 775 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 RWDD4Q6NW29 188 aaKnown RBP10.29□□□□□ -0.76
C4A-258ENST00000496659 TMCO3Q6UWJ1 677 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 Q6ZNB5 142 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 SLC13A5Q86YT5 568 aaPredicted RBP10.29□□□□□ -0.76
C4A-258ENST00000496659 FAM217AQ8IXS0 508 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 LGI2Q8N0V4 545 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 CPXM2Q8N436 756 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 LZTR1Q8N653 840 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 CEP112Q8N8E3 955 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 HJURPQ8NCD3 748 aaPredicted RBP10.29□□□□□ -0.76
C4A-258ENST00000496659 BPIFB1Q8TDL5 484 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 DEPDC1BQ8WUY9 529 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 TSC1Q92574 1164 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 FAF2Q96CS3 445 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 RPGRIP1Q96KN7 1286 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 CAPZA3Q96KX2 299 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 RNF157Q96PX1 679 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 FRMD8P1Q9BZ68 369 aaPredicted RBP10.29□□□□□ -0.76
C4A-258ENST00000496659 SMG9Q9H0W8 520 aaKnown RBP10.29□□□□□ -0.76
C4A-258ENST00000496659 VANGL2Q9ULK5 521 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 MRFAP1Q9Y605 127 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 DENND4AQ7Z401 1863 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 DENND4CQ5VZ89 1909 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 ANAPC1Q9H1A4 1944 aa10.29□□□□□ -0.76
C4A-258ENST00000496659 C2orf16Q68DN1 1984 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms