RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 LGI2Q8N0V4 545 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 CFAP52Q8N1V2 620 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 EMC1Q8N766 993 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 ATP6V0D2Q8N8Y2 350 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 HJURPQ8NCD3 748 aaPredicted RBP16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 MSANTD4Q8NCY6 345 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 JOSD2Q8TAC2 188 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 CFAP57Q96MR6 1250 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 METTL5Q9NRN9 209 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 ELOVL2Q9NXB9 296 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 ARHGEF38Q9NXL2 777 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 RRN3Q9NYV6 651 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 TAS2R14Q9NYV8 317 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 STIM2Q9P246 746 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 INTS6Q9UL03 887 aaKnown RBP16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 EP300Q09472 2414 aaPredicted RBP16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 FAM186AA6NE01 2351 aa16.7■□□□□ 0.26
DNMT3A-215ENST00000496570 ENDOD1O94919 500 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 HOXB2P14652 356 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 PRKCIP41743 596 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 IL12RB1P42701 662 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 NSFP46459 744 aaKnown RBP16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 IRAK1P51617 712 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 TPM4P67936 248 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 SIM2Q14190 667 aaPredicted RBP16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 EIF4HQ15056 248 aaKnown RBP16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 LPAL2Q16609 132 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 FUT11Q495W5 492 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 FBXL22Q6P050 247 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 TRMT11Q7Z4G4 463 aaKnown RBP16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 CHSY1Q86X52 802 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 ZNF683Q8IZ20 524 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 CHPFQ8IZ52 775 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 DCLK2Q8N568 766 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 FIBINQ8TAL6 211 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 DDX50Q9BQ39 737 aaKnown RBP16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 TPSD1Q9BZJ3 242 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 EDEM3Q9BZQ6 932 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 TMPRSS4Q9NRS4 437 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 GGA2Q9UJY4 613 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 RAD54BQ9Y620 910 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 HS3ST4Q9Y661 456 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 STON1Q9Y6Q2 735 aa16.69■□□□□ 0.26
DNMT3A-215ENST00000496570 TCRBV21S2A2A0A5A6 115 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 C2CD4BA6NLJ0 364 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 GOLGA6L19H0YKK7 550 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 DCLK1O15075 740 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 PAGE1O75459 146 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 LUC7L3O95232 432 aaKnown RBP16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 PABPC1P11940 636 aaKnown RBP16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 GABRG2P18507 467 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 ABCB4P21439 1286 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 GGCXP38435 758 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 LMAN2Q12907 356 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 ZNF234Q14588 700 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 PTPRNQ16849 979 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 CCDC14Q49A88 953 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 C5orf22Q49AR2 442 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 SH3PXD2AQ5TCZ1 1133 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 CHST9Q7L1S5 443 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 ZNF571Q7Z3V5 609 aaPredicted RBP16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 C14orf80Q86SX3 495 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 CIR1Q86X95 450 aaPredicted RBP16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 MFN1Q8IWA4 741 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 IGSF8Q969P0 613 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 ERLEC1Q96DZ1 483 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 HAUS4Q9H6D7 363 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 POLMQ9NP87 494 aaPredicted RBP16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 ADAM22Q9P0K1 906 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 IFNKQ9P0W0 207 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 STAP1Q9ULZ2 295 aa16.68■□□□□ 0.26
DNMT3A-215ENST00000496570 CKAP5Q14008 2032 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 A0A1W2PQJ5 194 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 TIMM44O43615 452 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 TGM1P22735 817 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 PRKCHP24723 683 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 DEUP1Q05D60 604 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 AUHQ13825 339 aaKnown RBP16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 ASIC2Q16515 512 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 PPP1R15BQ5SWA1 713 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 SFMBT2Q5VUG0 894 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 HGSNATQ68CP4 663 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 MBLAC2Q68D91 279 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 ACAD10Q6JQN1 1059 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 PRR23BQ6ZRT6 265 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 KBTBD6Q86V97 674 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 DNAAF5Q86Y56 855 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 MCOLN2Q8IZK6 566 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 AHI1Q8N157 1196 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 CARNMT1Q8N4J0 409 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 FAM160A2Q8N612 972 aaPredicted RBP16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 FRMD1Q8N878 549 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 C3orf20Q8ND61 904 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 WFIKKN2Q8TEU8 576 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 HMGB4Q8WW32 186 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 RXFP2Q8WXD0 754 aa16.67■□□□□ 0.26
DNMT3A-215ENST00000496570 RUBCNQ92622 972 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms