RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	BZW1	Q7L1Q6	419 aa	Known RBP	13.99	□□□□□ -0.17
APTX-231	ENST00000494973	CPNE8	Q86YQ8	564 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	YAF2	Q8IY57	180 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	TTC13	Q8NBP0	860 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	HJURP	Q8NCD3	748 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-231	ENST00000494973	MAFA	Q8NHW3	353 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-231	ENST00000494973	ACTRT1	Q8TDG2	376 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	KCTD15	Q96SI1	283 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-231	ENST00000494973	PHF7	Q9BWX1	381 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-231	ENST00000494973	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.99	□□□□□ -0.17
APTX-231	ENST00000494973	OSBPL8	Q9BZF1	889 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	ZYG11B	Q9C0D3	744 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	SIK2	Q9H0K1	926 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	RAB6C	Q9H0N0	254 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	HOMER3	Q9NSC5	361 aa		13.99	□□□□□ -0.17
APTX-231	ENST00000494973	IGLV3-10	A0A075B6K4	115 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	hCG_1818297	A0A087WSY0	165 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973		E9PAM4	449 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	CREB3	O43889	395 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	URI1	O94763	535 aa	Predicted RBP	13.98	□□□□□ -0.17
APTX-231	ENST00000494973	LRIG2	O94898	1065 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	EPHB2	P29323	1055 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	MAPKAPK2	P49137	400 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	AMPD2	Q01433	879 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	AUH	Q13825	339 aa	Known RBP	13.98	□□□□□ -0.17
APTX-231	ENST00000494973	WHAMMP3	Q1A5X7	153 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	C5orf22	Q49AR2	442 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	MPPE1	Q53F39	396 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	MANEAL	Q5VSG8	457 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	RAP1GAP2	Q684P5	730 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	TXNRD3NB	Q6F5E7	133 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	CHST9	Q7L1S5	443 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	RFX6	Q8HWS3	928 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	RASGEF1C	Q8N431	466 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	LZTR1	Q8N653	840 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	ADAMTS19	Q8TE59	1207 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	PPM1E	Q8WY54	764 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	RAPGEF5	Q92565	580 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	TSC1	Q92574	1164 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	RNF25	Q96BH1	459 aa	Predicted RBP	13.98	□□□□□ -0.17
APTX-231	ENST00000494973	ZSWIM3	Q96MP5	696 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	RPRD1A	Q96P16	312 aa	Predicted RBP	13.98	□□□□□ -0.17
APTX-231	ENST00000494973	CSPG4P5	Q96PW8	444 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	RNF157	Q96PX1	679 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	MYADM	Q96S97	322 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	PRMT1	Q99873	361 aa	Known RBP	13.98	□□□□□ -0.17
APTX-231	ENST00000494973	KLHL11	Q9NVR0	708 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	GPATCH2L	Q9NWQ4	482 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	CDC23	Q9UJX2	597 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	RAD54B	Q9Y620	910 aa		13.98	□□□□□ -0.17
APTX-231	ENST00000494973	DOCK8	Q8NF50	2099 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973		A0A1B0GVM2	712 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	GRXCR2	A6NFK2	248 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	TCAF2	A6NFQ2	919 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	HEPACAM2	A8MVW5	462 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	WASH4P	A8MWX3	477 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	APOL1	O14791	398 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	GREM1	O60565	184 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	CLDN11	O75508	207 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	NFATC1	O95644	943 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	ADH1C	P00326	375 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	KLKB1	P03952	638 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	PYGM	P11217	842 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	RHOQ	P17081	205 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	TGM2	P21980	687 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	ETFB	P38117	255 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	SMAD2	Q15796	467 aa	Known RBP	13.97	□□□□□ -0.17
APTX-231	ENST00000494973	CA9	Q16790	459 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	ATP13A4	Q4VNC1	1196 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	FAM133B	Q5BKY9	247 aa	Known RBP	13.97	□□□□□ -0.17
APTX-231	ENST00000494973	ANKRD20A8P	Q5CZ79	823 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	DCAF12L1	Q5VU92	463 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	RWDD4	Q6NW29	188 aa	Known RBP	13.97	□□□□□ -0.17
APTX-231	ENST00000494973	TMCO3	Q6UWJ1	677 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	MFSD7	Q6UXD7	560 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	BBS12	Q6ZW61	710 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	SLC13A5	Q86YT5	568 aa	Predicted RBP	13.97	□□□□□ -0.17
APTX-231	ENST00000494973	MFSD6L	Q8IWD5	586 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	ZDHHC14	Q8IZN3	488 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	LGI2	Q8N0V4	545 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	MNS1	Q8NEH6	495 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	OSCP1	Q8WVF1	389 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	ATP2A3	Q93084	1043 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	RPGRIP1	Q96KN7	1286 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	PSMB7	Q99436	277 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	SMG9	Q9H0W8	520 aa	Known RBP	13.97	□□□□□ -0.17
APTX-231	ENST00000494973	ANLN	Q9NQW6	1124 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	DUS2	Q9NX74	493 aa	Known RBP	13.97	□□□□□ -0.17
APTX-231	ENST00000494973	CWC15	Q9P013	229 aa	Known RBP	13.97	□□□□□ -0.17
APTX-231	ENST00000494973	VANGL2	Q9ULK5	521 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	CCL26	Q9Y258	94 aa		13.97	□□□□□ -0.17
APTX-231	ENST00000494973	C3orf70	A6NLC5	250 aa	Predicted RBP	13.96	□□□□□ -0.17
APTX-231	ENST00000494973	DRGX	A6NNA5	263 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	PI4K2B	G5E9Z4	385 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973		I6L893	689 aa	Predicted RBP	13.96	□□□□□ -0.17
APTX-231	ENST00000494973	NRG2	O14511	850 aa	Predicted RBP	13.96	□□□□□ -0.17
APTX-231	ENST00000494973	NCAM2	O15394	837 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	SRGAP2	O75044	1071 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	FGG	P02679	453 aa		13.96	□□□□□ -0.17
APTX-231	ENST00000494973	GOT1	P17174	413 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms