RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 RPS6KC1Q96S38 1066 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 MYADMQ96S97 322 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 GAD1Q99259 594 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 RPP25Q9BUL9 199 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 APOL6Q9BWW8 343 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 PITHD1Q9GZP4 211 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 MTG2Q9H4K7 406 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 RSAD1Q9HA92 442 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 WDR6Q9NNW5 1121 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 MAN1C1Q9NR34 630 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 NTMQ9P121 344 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 IGSF9Q9P2J2 1179 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 WRAP73Q9P2S5 460 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 WNT16Q9UBV4 365 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 DUSP12Q9UNI6 340 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 INVSQ9Y283 1065 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 HES2Q9Y543 173 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 SNX14Q9Y5W7 946 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 GPR45Q9Y5Y3 372 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 MRFAP1Q9Y605 127 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 MTCL1Q9Y4B5 1905 aaKnown RBP5.7□□□□□ -1.5
PTCD3-219ENST00000494323 DCHS1Q96JQ0 3298 aa5.7□□□□□ -1.5
PTCD3-219ENST00000494323 OTOGLQ3ZCN5 2332 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CYP3A7-CYP3A51PA0A087WV96 503 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 PRSS38A1L453 326 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 SH3D21A4FU49 640 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 GOLGA6CA6NDK9 693 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 GOLGA6BA6NDN3 693 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 ARL5CA6NH57 179 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 INPPL1O15357 1258 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 SLC37A4O43826 429 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 PEX14O75381 377 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 LMNAP02545 664 aaKnown RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 URODP06132 367 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 GOLGA6DP0CG33 693 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 LAMP2P13473 410 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 MTHFD2P13995 350 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 ZNF28P17035 718 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 IFNAR1P17181 557 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 C5AR1P21730 350 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CYP3A7P24462 503 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 AKAP5P24588 427 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 QARSP47897 775 aaKnown RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 MLLT6P55198 1093 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CD83Q01151 205 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 STK3Q13188 491 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 GALEQ14376 348 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 VWA3BQ502W6 1294 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 XKR9Q5GH70 373 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CT83Q5H943 113 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 BMP2KLQ5H9B9 411 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 TOR2AQ5JU69 321 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 GRAMD4Q6IC98 578 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 C15orf39Q6ZRI6 1047 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 SRGAP1Q7Z6B7 1085 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CDR2LQ86X02 465 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 SLC41A1Q8IVJ1 513 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 BLIDQ8IZY5 108 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 RNF149Q8NC42 400 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CCDC148Q8NFR7 591 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 RDM1Q8NG50 284 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 ETNPPLQ8TBG4 499 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 ZNF707Q96C28 371 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 TMEM175Q9BSA9 504 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 EIF2AQ9BY44 585 aaKnown RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 RNF26Q9BY78 433 aaPredicted RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 NT5C3AQ9H0P0 336 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 QRSL1Q9H0R6 528 aaKnown RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 L2HGDHQ9H9P8 463 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 TBC1D17Q9HA65 648 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 SH3GLB2Q9NR46 395 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 AGPAT5Q9NUQ2 364 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 DNAJC28Q9NX36 388 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 MARCH5Q9NX47 278 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 GOLGA6AQ9NYA3 693 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 RGL1Q9NZL6 768 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CACNG4Q9UBN1 327 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 FTSJ1Q9UET6 329 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 DDX25Q9UHL0 483 aaKnown RBP5.69□□□□□ -1.5
PTCD3-219ENST00000494323 TUBD1Q9UJT1 453 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 KCNJ14Q9UNX9 436 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 IPPQ9Y573 584 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 CACNA1BQ00975 2339 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 NCOR2Q9Y618 2525 aa5.69□□□□□ -1.5
PTCD3-219ENST00000494323 SDK1Q7Z5N4 2213 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 A0A0A6YYJ9 748 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 MED19A0JLT2 244 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 B8ZZF3 427 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 INO80B-WBP1J3KQ70 363 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 CUTAO60888 179 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 OPHN1O60890 802 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 GLUD1P00367 558 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 SP9P0CG40 484 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 OSMP13725 252 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 GLULP15104 373 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 RPS6KB1P23443 525 aa5.68□□□□□ -1.5
PTCD3-219ENST00000494323 YWHABP31946 246 aaKnown RBP5.68□□□□□ -1.5
PTCD3-219ENST00000494323 HSPA4P34932 840 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms