RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 DDX6P26196 483 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS52-220ENST00000493674 KCNQ1P51787 676 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 TPI1P60174 286 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 RBM10P98175 930 aaKnown RBP13.07□□□□□ -0.32
VPS52-220ENST00000493674 CYP4F8P98187 520 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 ELF2Q15723 593 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 MS4A13Q5J8X5 152 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 TXNDC8Q6A555 127 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 NADSYN1Q6IA69 706 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 CCDC137Q6PK04 289 aaKnown RBP13.07□□□□□ -0.32
VPS52-220ENST00000493674 RBM23Q86U06 439 aaKnown RBP13.07□□□□□ -0.32
VPS52-220ENST00000493674 UNC45BQ8IWX7 931 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 KLC2Q9H0B6 622 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 PRDM12Q9H4Q4 367 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 NSUN3Q9H649 340 aaKnown RBP13.07□□□□□ -0.32
VPS52-220ENST00000493674 AMACRQ9UHK6 382 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 DMGDHQ9UI17 866 aaKnown RBP13.07□□□□□ -0.32
VPS52-220ENST00000493674 DNPEPQ9ULA0 475 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 MFHAS1Q9Y4C4 1052 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 MYLKQ15746 1914 aa13.07□□□□□ -0.32
VPS52-220ENST00000493674 PRUNE2Q8WUY3 3088 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 A0A1W2PRU2 124 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 FAM187AA6NFU0 413 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 WASH4PA8MWX3 477 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 E9PAM4 449 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 GFRA2O00451 464 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 FGF10O15520 208 aaPredicted RBP13.06□□□□□ -0.32
VPS52-220ENST00000493674 TTI1O43156 1089 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 CREB3O43889 395 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 MFSD11O43934 449 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 KLKB1P03952 638 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 ITGAVP06756 1048 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 MYL4P12829 197 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 GGCXP38435 758 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 NR2C2P49116 596 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 DYNLT1P63172 113 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 ZXDBP98169 803 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 HYAL1Q12794 435 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 SLC10A2Q12908 348 aaPredicted RBP13.06□□□□□ -0.32
VPS52-220ENST00000493674 XRCC4Q13426 336 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 BYSLQ13895 437 aaKnown RBP13.06□□□□□ -0.32
VPS52-220ENST00000493674 SLC5A9Q2M3M2 681 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 FAM133BQ5BKY9 247 aaKnown RBP13.06□□□□□ -0.32
VPS52-220ENST00000493674 NPNTQ6UXI9 565 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 Q6ZNB5 142 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 MAATS1Q7Z4T9 603 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 C14orf80Q86SX3 495 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 FAM217AQ8IXS0 508 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 EFHBQ8N7U6 833 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 CCDC26Q8TAB7 109 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.06□□□□□ -0.32
VPS52-220ENST00000493674 MYLIPQ8WY64 445 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 WBP2Q969T9 261 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 TCEAL4Q96EI5 215 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 GCNAQ96QF7 691 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 PNKPQ96T60 521 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 MAK16Q9BXY0 300 aaKnown RBP13.06□□□□□ -0.32
VPS52-220ENST00000493674 SFXN1Q9H9B4 322 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 DTLQ9NZJ0 730 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 STIM2Q9P246 746 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 SAE1Q9UBE0 346 aaPredicted RBP13.06□□□□□ -0.32
VPS52-220ENST00000493674 PPARGC1AQ9UBK2 798 aaKnown RBP13.06□□□□□ -0.32
VPS52-220ENST00000493674 ZNF212Q9UDV6 495 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 ZMYM5Q9UJ78 669 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 RAB21Q9UL25 225 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 RAD54BQ9Y620 910 aa13.06□□□□□ -0.32
VPS52-220ENST00000493674 TRAV19A0A0A6YYK7 116 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 CCDC195A0A1B0GUA6 201 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 DRGXA6NNA5 263 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 ACSL4O60488 711 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 MOCS2O96007 188 aaPredicted RBP13.05□□□□□ -0.32
VPS52-220ENST00000493674 RHOXF2BP0C7M4 288 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 MBL2P11226 248 aaPredicted RBP13.05□□□□□ -0.32
VPS52-220ENST00000493674 TCF3P15923 654 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 ERCC2P18074 760 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 HDCP19113 662 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 TNFRSF8P28908 595 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 KCNJ1P48048 391 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 DR1Q01658 176 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 GBE1Q04446 702 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 AUHQ13825 339 aaKnown RBP13.05□□□□□ -0.32
VPS52-220ENST00000493674 COL19A1Q14993 1142 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 STXBP5Q5T5C0 1151 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 AFMIDQ63HM1 303 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 SYDE1Q6ZW31 735 aaPredicted RBP13.05□□□□□ -0.32
VPS52-220ENST00000493674 PDZD4Q76G19 769 aaPredicted RBP13.05□□□□□ -0.32
VPS52-220ENST00000493674 NLRP14Q86W24 1093 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 JAMLQ86YT9 394 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 ALLCQ8N6M5 410 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 NPWQ8N729 165 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 ARL14EPQ8N8R7 260 aaPredicted RBP13.05□□□□□ -0.32
VPS52-220ENST00000493674 ATL2Q8NHH9 583 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 GRK7Q8WTQ7 553 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 P3H4Q92791 437 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 PPP2R3CQ969Q6 453 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 HAUS1Q96CS2 278 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 TBC1D31Q96DN5 1066 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 RTP4Q96DX8 246 aa13.05□□□□□ -0.32
VPS52-220ENST00000493674 CYP2S1Q96SQ9 504 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms