RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SYNPOQ8N3V7 929 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 ATP6V0D2Q8N8Y2 350 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 BHMTQ93088 406 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 SLC39A13Q96H72 371 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 CCDC42Q96M95 316 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 BBS2Q9BXC9 721 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 ISCUQ9H1K1 167 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 NHEJ1Q9H9Q4 299 aaPredicted RBP12.02□□□□□ -0.49
CTSA-209ENST00000493522 GRPEL1Q9HAV7 217 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 RBM12Q9NTZ6 932 aaKnown RBP12.02□□□□□ -0.49
CTSA-209ENST00000493522 PIGVQ9NUD9 493 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 SPTLC3Q9NUV7 552 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 PARVAQ9NVD7 372 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 SCINQ9Y6U3 715 aa12.02□□□□□ -0.49
CTSA-209ENST00000493522 MYO18AQ92614 2054 aaKnown RBP12.02□□□□□ -0.49
CTSA-209ENST00000493522 MAP1BP46821 2468 aaKnown RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 TCRBV5S1A1TA0A578 114 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 C2CD4BA6NLJ0 364 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 SIGLEC16A6NMB1 481 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 TRDMT1O14717 391 aaKnown RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 ACSL4O60488 711 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 TSPAN3O60637 253 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 CYBBP04839 570 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 DESP17661 470 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 HOXA6P31267 233 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 CCR1P32246 355 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 RDXP35241 583 aaKnown RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 RFC1P35251 1148 aaPredicted RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 CHKAP35790 457 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 PTPN9P43378 593 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 RPL7AP62424 266 aaKnown RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 KDSRQ06136 332 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 SRSF5Q13243 272 aaKnown RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 CCINQ13939 588 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 SLC18A3Q16572 532 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 C15orf59Q2T9L4 293 aaPredicted RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 NAIF1Q69YI7 327 aaPredicted RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 IL31Q6EBC2 164 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 PLEKHA7Q6IQ23 1121 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 RHBDF2Q6PJF5 856 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 TMEM25Q86YD3 366 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 ADGRG2Q8IZP9 1017 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 CPXM2Q8N436 756 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 CD101Q93033 1021 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 EXOC4Q96A65 974 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 DDX50Q9BQ39 737 aaKnown RBP12.01□□□□□ -0.49
CTSA-209ENST00000493522 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.01□□□□□ -0.49
CTSA-209ENST00000493522 CALCOCO1Q9P1Z2 691 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 SLC12A6Q9UHW9 1150 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 PAXBP1Q9Y5B6 917 aa12.01□□□□□ -0.49
CTSA-209ENST00000493522 LAMA1P25391 3075 aa12□□□□□ -0.49
CTSA-209ENST00000493522 TYW5A2RUC4 315 aaKnown RBP12□□□□□ -0.49
CTSA-209ENST00000493522 HOXC11O43248 304 aaPredicted RBP12□□□□□ -0.49
CTSA-209ENST00000493522 CCP110O43303 1012 aa12□□□□□ -0.49
CTSA-209ENST00000493522 F9P00740 461 aa12□□□□□ -0.49
CTSA-209ENST00000493522 TYRP14679 529 aa12□□□□□ -0.49
CTSA-209ENST00000493522 PSMA2P25787 234 aa12□□□□□ -0.49
CTSA-209ENST00000493522 SLC6A4P31645 630 aa12□□□□□ -0.49
CTSA-209ENST00000493522 OPRD1P41143 372 aa12□□□□□ -0.49
CTSA-209ENST00000493522 GALCP54803 685 aa12□□□□□ -0.49
CTSA-209ENST00000493522 MAMLD1Q13495 774 aa12□□□□□ -0.49
CTSA-209ENST00000493522 ASTE1Q2TB18 679 aaPredicted RBP12□□□□□ -0.49
CTSA-209ENST00000493522 GAB4Q2WGN9 574 aa12□□□□□ -0.49
CTSA-209ENST00000493522 CCDC14Q49A88 953 aa12□□□□□ -0.49
CTSA-209ENST00000493522 AASDHQ4L235 1098 aaPredicted RBP12□□□□□ -0.49
CTSA-209ENST00000493522 FAM133BQ5BKY9 247 aaKnown RBP12□□□□□ -0.49
CTSA-209ENST00000493522 BRMS1LQ5PSV4 323 aa12□□□□□ -0.49
CTSA-209ENST00000493522 PPP1R15BQ5SWA1 713 aa12□□□□□ -0.49
CTSA-209ENST00000493522 ADGRF1Q5T601 910 aa12□□□□□ -0.49
CTSA-209ENST00000493522 RAP1GAP2Q684P5 730 aa12□□□□□ -0.49
CTSA-209ENST00000493522 NADSYN1Q6IA69 706 aa12□□□□□ -0.49
CTSA-209ENST00000493522 RFWD3Q6PCD5 774 aa12□□□□□ -0.49
CTSA-209ENST00000493522 WDR5BQ86VZ2 330 aa12□□□□□ -0.49
CTSA-209ENST00000493522 C12orf40Q86WS4 652 aa12□□□□□ -0.49
CTSA-209ENST00000493522 FAM131BQ86XD5 332 aa12□□□□□ -0.49
CTSA-209ENST00000493522 FAM217AQ8IXS0 508 aa12□□□□□ -0.49
CTSA-209ENST00000493522 FAM160A2Q8N612 972 aaPredicted RBP12□□□□□ -0.49
CTSA-209ENST00000493522 NAT16Q8N8M0 369 aa12□□□□□ -0.49
CTSA-209ENST00000493522 DDI1Q8WTU0 396 aa12□□□□□ -0.49
CTSA-209ENST00000493522 FAM172AQ8WUF8 416 aa12□□□□□ -0.49
CTSA-209ENST00000493522 CTNNBL1Q8WYA6 563 aaPredicted RBP12□□□□□ -0.49
CTSA-209ENST00000493522 NT5C3BQ969T7 300 aa12□□□□□ -0.49
CTSA-209ENST00000493522 CHFRQ96EP1 664 aa12□□□□□ -0.49
CTSA-209ENST00000493522 BTN2A3PQ96KV6 586 aa12□□□□□ -0.49
CTSA-209ENST00000493522 PANX2Q96RD6 677 aa12□□□□□ -0.49
CTSA-209ENST00000493522 P2RY13Q9BPV8 354 aa12□□□□□ -0.49
CTSA-209ENST00000493522 THAP2Q9H0W7 228 aa12□□□□□ -0.49
CTSA-209ENST00000493522 MRPL47Q9HD33 250 aaKnown RBP12□□□□□ -0.49
CTSA-209ENST00000493522 DNAJC17Q9NVM6 304 aaKnown RBP12□□□□□ -0.49
CTSA-209ENST00000493522 PLK2Q9NYY3 685 aa12□□□□□ -0.49
CTSA-209ENST00000493522 MARK1Q9P0L2 795 aa12□□□□□ -0.49
CTSA-209ENST00000493522 IMPACTQ9P2X3 320 aa12□□□□□ -0.49
CTSA-209ENST00000493522 XPO7Q9UIA9 1087 aaKnown RBP12□□□□□ -0.49
CTSA-209ENST00000493522 NENFQ9UMX5 172 aa12□□□□□ -0.49
CTSA-209ENST00000493522 MUC22E2RYF6 1773 aaPredicted RBP12□□□□□ -0.49
CTSA-209ENST00000493522 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 GOLGA6L7A0A1B0GV03 622 aa11.99□□□□□ -0.49
CTSA-209ENST00000493522 KCNU1A8MYU2 1149 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms