RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 LINC01465Q8N7H1 131 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 ADPRHL1Q8NDY3 354 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 STAMQ92783 540 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 USP13Q92995 863 aaPredicted RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 AGAP2Q99490 1192 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 HTATIP2Q9BUP3 242 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 OSBPL5Q9H0X9 879 aaPredicted RBP4.43□□□□□ -1.7
CLK1-213ENST00000492793 SEMA4GQ9NTN9 838 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 SERGEFQ9UGK8 458 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 MAFFQ9ULX9 164 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 B3GNT3Q9Y2A9 372 aa4.43□□□□□ -1.7
CLK1-213ENST00000492793 TCRBV5S1A1TA0A578 114 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 FAM90A20PA6NIJ5 464 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 H3BNC9 293 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 HNRNPRO43390 633 aaKnown RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 ANP32CO43423 234 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 SH3BP5O60239 455 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 KAT7O95251 611 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 IGLV2-14P01704 120 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 SLPIP03973 132 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 CYP21A2P08686 494 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 XBP1P17861 261 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 MCM2P49736 904 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 CDK7P50613 346 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 SHC2P98077 582 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 UBE3AQ05086 875 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 GPR162Q16538 588 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 ANXA2RQ3ZCQ2 193 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 CTXN3Q4LDR2 81 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 GLE1Q53GS7 698 aaKnown RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 RUNDC3AQ59EK9 446 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 ZNF484Q5JVG2 852 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 FCRLBQ6BAA4 426 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 FBXO42Q6P3S6 717 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 SLC39A5Q6ZMH5 540 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 LRRTM4Q86VH4 590 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 HERC6Q8IVU3 1022 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 LINS1Q8NG48 757 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 CELF1Q92879 486 aaKnown RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 EVI5LQ96CN4 794 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 MAELQ96JY0 434 aaKnown RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 ASB2Q96Q27 587 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 SENP7Q9BQF6 1050 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 MRIQ9BWK5 157 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 RNF26Q9BY78 433 aaPredicted RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 TMPRSS5Q9H3S3 457 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 SYNPO2LQ9H987 977 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 SFXN1Q9H9B4 322 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 IFT80Q9P2H3 777 aaPredicted RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 ARPP21Q9UBL0 812 aaPredicted RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 LZTS1Q9Y250 596 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 RCE1Q9Y256 329 aa4.42□□□□□ -1.7
CLK1-213ENST00000492793 COPG1Q9Y678 874 aaKnown RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 SIRT4Q9Y6E7 314 aaPredicted RBP4.42□□□□□ -1.7
CLK1-213ENST00000492793 LRRC3CA6NJW4 275 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 GRM8O00222 908 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 PRYO14603 147 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 WDHD1O75717 1129 aaPredicted RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 ENO1P06733 434 aaKnown RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 CYP3A4P08684 503 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 CHRM5P08912 532 aaPredicted RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 ALDOCP09972 364 aaKnown RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 NHLRC4P0CG21 123 aaPredicted RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 TACR3P29371 465 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 HOXD12P35452 270 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 CLK3P49761 638 aaKnown RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 ELLP55199 621 aaPredicted RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 FOXL2P58012 376 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 CDK18Q07002 472 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 GOLGA8FQ08AF8 430 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 MTA1Q13330 715 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 TRPC3Q13507 836 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 SLC4A8Q2Y0W8 1093 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 TMEM88Q6PEY1 159 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 RASGRP2Q7LDG7 609 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 UEVLDQ8IX04 471 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 LAS2Q8IYD9 372 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 VPS52Q8N1B4 723 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 PTGR2Q8N8N7 351 aaPredicted RBP4.41□□□□□ -1.7
CLK1-213ENST00000492793 ASB12Q8WXK4 309 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 PIGKQ92643 395 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 RITA1Q96K30 269 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 EFHD1Q9BUP0 239 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 TRIM31Q9BZY9 425 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 TWSG1Q9GZX9 223 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 ABHD16BQ9H3Z7 469 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.41□□□□□ -1.7
CLK1-213ENST00000492793 GGA3Q9NZ52 723 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 SUFUQ9UMX1 484 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 SLC8A2Q9UPR5 921 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 DNAJC16Q9Y2G8 782 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 SPATA31A1Q5TZJ5 1347 aa4.41□□□□□ -1.7
CLK1-213ENST00000492793 MANSC4A6NHS7 340 aaPredicted RBP4.4□□□□□ -1.71
CLK1-213ENST00000492793 PEX12O00623 359 aa4.4□□□□□ -1.71
CLK1-213ENST00000492793 SYN3O14994 580 aa4.4□□□□□ -1.71
CLK1-213ENST00000492793 KLK10O43240 276 aa4.4□□□□□ -1.71
CLK1-213ENST00000492793 AKAP8O43823 692 aaKnown RBP4.4□□□□□ -1.71
CLK1-213ENST00000492793 CSF1P09603 554 aa4.4□□□□□ -1.71
CLK1-213ENST00000492793 CYP2A6P11509 494 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms