RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 PRPF39Q86UA1 669 aaKnown RBP5.65□□□□□ -1.5
SEC13-219ENST00000492602 TBC1D3Q8IZP1 549 aaPredicted RBP5.65□□□□□ -1.5
SEC13-219ENST00000492602 TMEM86AQ8N2M4 240 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 RBBP8NLQ8NC74 664 aaPredicted RBP5.65□□□□□ -1.5
SEC13-219ENST00000492602 OR14C36Q8NHC7 312 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 WDR48Q8TAF3 677 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 CYB5D2Q8WUJ1 264 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 USP7Q93009 1102 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 KLHDC7BQ96G42 594 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 PIWIL1Q96J94 861 aaKnown RBP5.65□□□□□ -1.5
SEC13-219ENST00000492602 C8orf48Q96LL4 319 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 ZNF560Q96MR9 790 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 SYT15Q9BQS2 421 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 FOXP3Q9BZS1 431 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 KLHL11Q9NVR0 708 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 ORC3Q9UBD5 711 aaPredicted RBP5.65□□□□□ -1.5
SEC13-219ENST00000492602 PPM1HQ9ULR3 514 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 CLEC4EQ9ULY5 219 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 SCML1Q9UN30 329 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 KCNJ14Q9UNX9 436 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 CA5BQ9Y2D0 317 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 DERAQ9Y315 318 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 LOXL2Q9Y4K0 774 aa5.65□□□□□ -1.5
SEC13-219ENST00000492602 HIVEP3Q5T1R4 2406 aa5.65□□□□□ -1.51
SEC13-219ENST00000492602 TCHHQ07283 1943 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 SLC12A8A0AV02 714 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 SFI1A8K8P3 1242 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 ZNF891A8MT65 544 aaPredicted RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 OGTO15294 1046 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 NKX2-8O15522 239 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 TIMM44O43615 452 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 FAM189A1O60320 539 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 RNASEH1O60930 286 aaKnown RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 HIP1RO75146 1068 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 FAM155BO75949 473 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 CDKL5O76039 1030 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 TBX18O95935 607 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 PENKP01210 267 aaPredicted RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 PRKAR1AP10644 381 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 PYGBP11216 843 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 LIFP15018 202 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 LMO2P25791 158 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 PNPLA4P41247 253 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 TUBP50607 506 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 ATP1A2P50993 1020 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 EHHADHQ08426 723 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 KCNMA1Q12791 1236 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 MAPRE1Q15691 268 aaKnown RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 DEFB109BQ30KR1 87 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 TSGA10IPQ3SY00 556 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 ZNF542PQ5EBM4 170 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 EARS2Q5JPH6 523 aaKnown RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 BLOC1S2Q6QNY1 142 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 ASB18Q6ZVZ8 466 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 HS2ST1Q7LGA3 356 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 DAW1Q8N136 415 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 NUP93Q8N1F7 819 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 IL22RA1Q8N6P7 574 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 OR6B3Q8NGW1 331 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 APOBEC4Q8WW27 367 aaKnown RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 OVCA2Q8WZ82 227 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 PCED1BQ96HM7 432 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 PPP1R13BQ96KQ4 1090 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 JAKMIP1Q96N16 626 aaKnown RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 CCDC3Q9BQI4 270 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 KLF16Q9BXK1 252 aaPredicted RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 RSPH9Q9H1X1 276 aaPredicted RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 MTG2Q9H4K7 406 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 CRTAC1Q9NQ79 661 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 NCKIPSDQ9NZQ3 722 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 ARHGAP20Q9P2F6 1191 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 CPSF3Q9UKF6 684 aaKnown RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 TPX2Q9ULW0 747 aaKnown RBP5.64□□□□□ -1.51
SEC13-219ENST00000492602 SLC5A6Q9Y289 635 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 C2CD2Q9Y426 696 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 DAAM1Q9Y4D1 1078 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 SNX9Q9Y5X1 595 aa5.64□□□□□ -1.51
SEC13-219ENST00000492602 DOCK9Q9BZ29 2069 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 C9orf172C9J069 976 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 STMND1H3BQB6 276 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 TMX2-CTNND1H3BSU7 103 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 WNT7AO00755 349 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 GABRDO14764 452 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 LATO43561 262 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 TLR5O60602 858 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 RTN3O95197 1032 aaPredicted RBP5.63□□□□□ -1.51
SEC13-219ENST00000492602 DEXIO95424 95 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 PDGFRBP09619 1106 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 RPA1P27694 616 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 CD82P27701 267 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 POLR2BP30876 1174 aaKnown RBP5.63□□□□□ -1.51
SEC13-219ENST00000492602 ETV5P41161 510 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 LIG4P49917 911 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 SMTNP53814 917 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 CACNA2D1P54289 1103 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 ADPRHP54922 357 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 STK3Q13188 491 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 TOB2Q14106 344 aaPredicted RBP5.63□□□□□ -1.51
SEC13-219ENST00000492602 FGL2Q14314 439 aa5.63□□□□□ -1.51
SEC13-219ENST00000492602 NR0B2Q15466 257 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms