RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SYT15Q9BQS2 421 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 KLHL8Q9P2G9 620 aaPredicted RBP12.81□□□□□ -0.36
HMGN1-220ENST00000492280 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 FAM159BA6NKW6 160 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 SMAPO00193 183 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 ITM2AO43736 263 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 DAB1O75553 588 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 FAM200BP0CF97 657 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 EZRP15311 586 aaKnown RBP12.81□□□□□ -0.36
HMGN1-220ENST00000492280 KCNE1P15382 129 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 CRYMQ14894 314 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 DLG2Q15700 870 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 EFHC1Q5JVL4 640 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 STRADAQ7RTN6 431 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 FAM35AQ86V20 835 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 NUDCD3Q8IVD9 361 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 HSFY1Q96LI6 401 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 PPP1R10Q96QC0 940 aaKnown RBP12.81□□□□□ -0.36
HMGN1-220ENST00000492280 NPY6RQ99463 290 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 HNRNPABQ99729 332 aaKnown RBP12.81□□□□□ -0.36
HMGN1-220ENST00000492280 SHCBP1LQ9BZQ2 653 aa12.81□□□□□ -0.36
HMGN1-220ENST00000492280 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 ATP9BO43861 1147 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 PURAQ00577 322 aaKnown RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 TRIM32Q13049 653 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 CST9Q5W186 159 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 DSTYKQ6XUX3 929 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 AGR3Q8TD06 166 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 AGAP2Q99490 1192 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 GORASP1Q9BQQ3 440 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 UNKQ9C0B0 810 aaKnown RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 ARHGAP39Q9C0H5 1083 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 AP5M1Q9H0R1 490 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 AGO3Q9H9G7 860 aaKnown RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 CAB39LQ9H9S4 337 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 PNPLA8Q9NP80 782 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 HAS3O00219 553 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 FCHO1O14526 889 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 SPAG6O75602 509 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 KRT38O76015 456 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 ITGB1P05556 798 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 TPSB2P20231 275 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 MAGEA6P43360 314 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 ACADSBP45954 432 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 PGFP49763 221 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 ALDH18A1P54886 795 aaKnown RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 ZBTB17Q13105 803 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 TPSAB1Q15661 275 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 GNASQ5JWF2 1037 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 WLSQ5T9L3 541 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 GDF6Q6KF10 455 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 ARHGAP36Q6ZRI8 547 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 RINLQ6ZS11 566 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 TREML1Q86YW5 311 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 MCUQ8NE86 351 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 TRPV1Q8NER1 839 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 ACVR1CQ8NER5 493 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 N4BP2L2Q92802 583 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 E2F7Q96AV8 911 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 FCRL3Q96P31 734 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 CADM1Q9BY67 442 aaKnown RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 DENND2DQ9H6A0 471 aaPredicted RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 WDR6Q9NNW5 1121 aaKnown RBP12.8□□□□□ -0.36
HMGN1-220ENST00000492280 XPNPEP3Q9NQH7 507 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 RPS6KL1Q9Y6S9 549 aa12.8□□□□□ -0.36
HMGN1-220ENST00000492280 TSC2P49815 1807 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 MEI4A8MW99 385 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 ENO1P06733 434 aaKnown RBP12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SRGAP2BP0DMP2 458 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 WARSP23381 471 aaKnown RBP12.79□□□□□ -0.36
HMGN1-220ENST00000492280 BDNFP23560 247 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SLC8A1P32418 973 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 NOS2P35228 1153 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 CRYBB1P53674 252 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-220ENST00000492280 AQP5P55064 265 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SLC8A3P57103 927 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 TPI1P60174 286 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 CDK16Q00536 496 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 N4BP2L1Q5TBK1 243 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-220ENST00000492280 KDELC2Q7Z4H8 507 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 RASSF3Q86WH2 238 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 CHSY1Q86X52 802 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 PNPLA1Q8N8W4 532 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SCAMP5Q8TAC9 235 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SKA1Q96BD8 255 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 ZNF669Q96BR6 464 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-220ENST00000492280 OXCT2Q9BYC2 517 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SIK2Q9H0K1 926 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 FAM105AQ9NUU6 356 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 PPARGC1AQ9UBK2 798 aaKnown RBP12.79□□□□□ -0.36
HMGN1-220ENST00000492280 MCM8Q9UJA3 840 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 EMCNQ9ULC0 261 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SLC45A1Q9Y2W3 748 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 TRPM7Q96QT4 1865 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SCN4AP35499 1836 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 PEX11AO75192 247 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 SAT1P21673 171 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 MAP2K2P36507 400 aa12.79□□□□□ -0.36
HMGN1-220ENST00000492280 PNPLA4P41247 253 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms