RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 ZNF397Q8NF99 534 aaPredicted RBP15.64■□□□□ 0.09
USP39-217ENST00000491659 EPS8L1Q8TE68 723 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 SORCS1Q8WY21 1168 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 RNF34Q969K3 372 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 MRGPRX1Q96LB2 322 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 CD248Q9HCU0 757 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 ABCA7Q8IZY2 2146 aa15.64■□□□□ 0.09
USP39-217ENST00000491659 NYNRINQ9P2P1 1898 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 KCNU1A8MYU2 1149 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 F5H5T6 163 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 AP5Z1O43299 807 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 GFPT2O94808 682 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 CAVIN2O95810 425 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 ATP5BP06576 529 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 EPHX1P07099 455 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 POLR2EP19388 210 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 TACR2P21452 398 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 PRKCHP24723 683 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 NOS2P35228 1153 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 RPS24P62847 133 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 RPL6Q02878 288 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 UBXN1Q04323 297 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 MTA1Q13330 715 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 SF3A2Q15428 464 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 SYCP1Q15431 976 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 FUT11Q495W5 492 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 ANO6Q4KMQ2 910 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 SPDYCQ5MJ68 293 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 MBLAC2Q68D91 279 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 CAVIN1Q6NZI2 390 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 ARMCX6Q7L4S7 300 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 KIAA0907Q7Z7F0 614 aaPredicted RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 ADIPOR2Q86V24 386 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 ZNF677Q86XU0 584 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 LGI2Q8N0V4 545 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 NEK11Q8NG66 645 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 WFDC5Q8TCV5 224 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 DDX1Q92499 740 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 C18orf8Q96DM3 657 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 RTKNQ9BST9 563 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 NLRC4Q9NPP4 1024 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 RRN3Q9NYV6 651 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 XPO7Q9UIA9 1087 aaKnown RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 MBD1Q9UIS9 605 aaPredicted RBP15.63■□□□□ 0.09
USP39-217ENST00000491659 STAP1Q9ULZ2 295 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 CYP8B1Q9UNU6 501 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 PLA2G4CQ9UP65 541 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 SIK3Q9Y2K2 1263 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 CEP250Q9BV73 2442 aa15.63■□□□□ 0.09
USP39-217ENST00000491659 DMXL1Q9Y485 3027 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 SDK1Q7Z5N4 2213 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 IGHV1OR15-9A0A0B4J2B8 117 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 LUC7L3O95232 432 aaKnown RBP15.62■□□□□ 0.09
USP39-217ENST00000491659 MMEP08473 750 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 ZNF18P17022 549 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 CD70P32970 193 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 SOX5P35711 763 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 SCNN1AP37088 669 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 STAT1P42224 750 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 DPP6P42658 865 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 JAM2P57087 298 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 NME3Q13232 169 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 EIF4EBP2Q13542 120 aaPredicted RBP15.62■□□□□ 0.09
USP39-217ENST00000491659 NCAPHQ15003 741 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 FAM102AQ5T9C2 384 aaPredicted RBP15.62■□□□□ 0.09
USP39-217ENST00000491659 TTC39BQ5VTQ0 682 aaPredicted RBP15.62■□□□□ 0.09
USP39-217ENST00000491659 LYSMD4Q5XG99 296 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 TMEFF1Q8IYR6 380 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 CFAP52Q8N1V2 620 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 FRMD1Q8N878 549 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 FIBINQ8TAL6 211 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 CYB5D2Q8WUJ1 264 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 SLC6A17Q9H1V8 727 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 SMOC1Q9H4F8 434 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 PRDM16Q9HAZ2 1276 aa15.62■□□□□ 0.09
USP39-217ENST00000491659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP39-217ENST00000491659 H0Y626 953 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 M0QYT0 321 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 SLC30A4O14863 429 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 EPHB6O15197 1021 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 MOCS3O95396 460 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 DLDP09622 509 aaKnown RBP15.61■□□□□ 0.09
USP39-217ENST00000491659 HLA-EP13747 358 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 MATKP42679 507 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 GABRB2P47870 512 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 SULT1E1P49888 294 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 RNASE9P60153 205 aaKnown RBP15.61■□□□□ 0.09
USP39-217ENST00000491659 NOMO3P69849 1222 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 FOXK2Q01167 660 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 CDR2Q01850 454 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 LMAN2Q12907 356 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 RABGAP1LQ5R372 815 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 NAA35Q5VZE5 725 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 SND1Q7KZF4 910 aaKnown RBP eCLIP15.61■□□□□ 0.09
USP39-217ENST00000491659 XYLT1Q86Y38 959 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 PIGKQ92643 395 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 PRCCQ92733 491 aaPredicted RBP15.61■□□□□ 0.09
USP39-217ENST00000491659 MYEOVQ96EZ4 313 aa15.61■□□□□ 0.09
USP39-217ENST00000491659 BPIFA3Q9BQP9 254 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms