RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 NEK11Q8NG66 645 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 SLC20A1Q8WUM9 679 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 PGAP3Q96FM1 320 aaPredicted RBP15.76■□□□□ 0.11
COL27A1-206ENST00000490831 SPACA7Q96KW9 195 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 SPAG5Q96R06 1193 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 NPY6RQ99463 290 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 CIPCQ9C0C6 399 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 ARRDC1-AS1Q9H2J1 176 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 FAM204AQ9H8W3 233 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 DLL3Q9NYJ7 618 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 CALCOCO1Q9P1Z2 691 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 SLC12A6Q9UHW9 1150 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 MBD1Q9UIS9 605 aaPredicted RBP15.76■□□□□ 0.11
COL27A1-206ENST00000490831 USP18Q9UMW8 372 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 INVSQ9Y283 1065 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 RAD54BQ9Y620 910 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 MUC22E2RYF6 1773 aaPredicted RBP15.76■□□□□ 0.11
COL27A1-206ENST00000490831 CKAP5Q14008 2032 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 RALGAPA1Q6GYQ0 2036 aa15.76■□□□□ 0.11
COL27A1-206ENST00000490831 TYW5A2RUC4 315 aaKnown RBP15.75■□□□□ 0.11
COL27A1-206ENST00000490831 ZNF217O75362 1048 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 ABCB4P21439 1286 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 TACR2P21452 398 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 CD70P32970 193 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 ID4P47928 161 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 ZNF165P49910 485 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 STARD3Q14849 445 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 IQCB1Q15051 598 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 PTPRNQ16849 979 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 FUT11Q495W5 492 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 TRIM72Q6ZMU5 477 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 PRR23CQ6ZRP0 262 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 BNIPLQ7Z465 357 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 MFN1Q8IWA4 741 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 MSANTD4Q8NCY6 345 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 RLN3Q8WXF3 142 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 SORCS1Q8WY21 1168 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 TTC17Q96AE7 1141 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 RMDN1Q96DB5 314 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 MRGPRX1Q96LB2 322 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 ADAM33Q9BZ11 813 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 TMEM245Q9H330 911 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 RTN4Q9NQC3 1192 aaKnown RBP15.75■□□□□ 0.11
COL27A1-206ENST00000490831 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.75■□□□□ 0.11
COL27A1-206ENST00000490831 TMEM59LQ9UK28 342 aa15.75■□□□□ 0.11
COL27A1-206ENST00000490831 BCLAF3A2AJT9 711 aaKnown RBP15.74■□□□□ 0.11
COL27A1-206ENST00000490831 ZBTB24O43167 697 aaPredicted RBP15.74■□□□□ 0.11
COL27A1-206ENST00000490831 LUC7L3O95232 432 aaKnown RBP15.74■□□□□ 0.11
COL27A1-206ENST00000490831 DLDP09622 509 aaKnown RBP15.74■□□□□ 0.11
COL27A1-206ENST00000490831 MMP8P22894 467 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 PRKCHP24723 683 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 MPLP40238 635 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 CXCR3P49682 368 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 LMAN2Q12907 356 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 NAA35Q5VZE5 725 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 RAP1GAP2Q684P5 730 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 MBLAC2Q68D91 279 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 CHSY1Q86X52 802 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 LGI2Q8N0V4 545 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 PGBD3Q8N328 593 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 FRMD1Q8N878 549 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 CPA5Q8WXQ8 436 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 STIM2Q9P246 746 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 INTS6Q9UL03 887 aaKnown RBP15.74■□□□□ 0.11
COL27A1-206ENST00000490831 STAP1Q9ULZ2 295 aa15.74■□□□□ 0.11
COL27A1-206ENST00000490831 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.74■□□□□ 0.11
COL27A1-206ENST00000490831 THADAQ6YHU6 1953 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 IGHV1OR15-9A0A0B4J2B8 117 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 F5H5T6 163 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 M0QYT0 321 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 TEX33O43247 280 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 F9P00740 461 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 ATP5BP06576 529 aaKnown RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 UNGP13051 313 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 POLR2EP19388 210 aaKnown RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 PTMSP20962 102 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 SDHBP21912 280 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 COPAP53621 1224 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 GSCP56915 257 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 CAMK2GQ13555 558 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 SLC25A52Q3SY17 297 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 C5orf22Q49AR2 442 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 BRMS1LQ5PSV4 323 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 FAM102AQ5T9C2 384 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 TTC39BQ5VTQ0 682 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 TRNP1Q6NT89 227 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 SERPINA13PQ6UXR4 307 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 SLC36A4Q6YBV0 504 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 LPCAT2Q7L5N7 544 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 CFAP52Q8N1V2 620 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 KDM1BQ8NB78 822 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 PCMTD1Q96MG8 357 aaPredicted RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 MKRN2Q9H000 416 aaKnown RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 VPS45Q9NRW7 570 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 PIGVQ9NUD9 493 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 ARHGEF38Q9NXL2 777 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 USP36Q9P275 1121 aaKnown RBP15.73■□□□□ 0.11
COL27A1-206ENST00000490831 MYO6Q9UM54 1294 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 PLA2G4CQ9UP65 541 aa15.73■□□□□ 0.11
COL27A1-206ENST00000490831 DNAH14Q0VDD8 3507 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms