RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 OXTRP30559 389 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SLC11A2P49281 568 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FAM193AP78312 1265 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FOXC1Q12948 553 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 NNTQ13423 1086 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 EIF4EBP2Q13542 120 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CAMK4Q16566 473 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 PLEKHG6Q3KR16 790 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FNDC3BQ53EP0 1204 aaKnown RBP20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 WDR45BQ5MNZ6 344 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 DCAF12L1Q5VU92 463 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TRIM65Q6PJ69 517 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 CACUL1Q86Y37 369 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 WDTC1Q8N5D0 677 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FIBINQ8TAL6 211 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 NUP58Q9BVL2 599 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TMEM121BQ9BXQ6 578 aaPredicted RBP20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 PRSS16Q9NQE7 514 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ST7Q9NRC1 585 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TJP2Q9UDY2 1190 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 XPO7Q9UIA9 1087 aaKnown RBP20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 PLA2G4CQ9UP65 541 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SLCO1B1Q9Y6L6 691 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FREM2Q5SZK8 3169 aa20.16■□□□□ 0.82
TNFRSF1B-202ENST00000489921 E5RJQ4 531 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 OPHN1O60890 802 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 LETM1O95202 739 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 IGLV3-25P01717 112 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 DLDP09622 509 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ACADSBP45954 432 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ATXN3P54252 364 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 RPS24P62847 133 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 PITX1P78337 314 aaPredicted RBP20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 BNC1Q01954 994 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 ARID5AQ03989 594 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 FSCBQ5H9T9 825 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TAC4Q86UU9 113 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 GOLGA1Q92805 767 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 TTC17Q96AE7 1141 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SERPINB11Q96P15 392 aa20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 NUCKS1Q9H1E3 243 aaKnown RBP20.15■□□□□ 0.82
TNFRSF1B-202ENST00000489921 SPAARA0A1B0GVQ0 90 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SYPP08247 313 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ACADMP11310 421 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ACSL1P33121 698 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 RPS14P62263 151 aaKnown RBP20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 GRIK2Q13002 908 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 TAF5Q15542 800 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MS4A13Q5J8X5 152 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 FAM149B1Q96BN6 582 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MRGPRX3Q96LB0 322 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MTG2Q9H4K7 406 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SLC32A1Q9H598 525 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 STIM2Q9P246 746 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SUSD2Q9UGT4 822 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 AJAP1Q9UKB5 411 aaPredicted RBP20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 IGF2RP11717 2491 aa20.14■□□□□ 0.81
TNFRSF1B-202ENST00000489921 A0A1B0GTW7 788 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 C1QTNF9BB2RNN3 333 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 FGFR1OPO95684 399 aaKnown RBP20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 C1QTNF9P0C862 333 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 GNSP15586 552 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 GNA15P30679 374 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 UBE2HP62256 183 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 DCAF6Q58WW2 860 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 DPY19L2P1Q6NXN4 242 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MMS22LQ6ZRQ5 1243 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ENOSF1Q7L5Y1 443 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 FAM124AQ86V42 546 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MFN1Q8IWA4 741 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CFAP52Q8N1V2 620 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 HDDC3Q8N4P3 179 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ZCCHC9Q8N567 271 aaKnown RBP20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 HJURPQ8NCD3 748 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CAMK1GQ96NX5 476 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SCNM1Q9BWG6 230 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 C6orf106Q9H6K1 298 aaPredicted RBP20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SIX2Q9NPC8 291 aa20.13■□□□□ 0.81
TNFRSF1B-202ENST00000489921 NYNRINQ9P2P1 1898 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MEI4A8MW99 385 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SART1O43290 800 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 THAP12O43422 761 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MED7O43513 233 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ATP5BP06576 529 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 POLR2EP19388 210 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 PON1P27169 355 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SLC14A1Q13336 389 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 PDCLQ13371 301 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 ZC3H12AQ5D1E8 599 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SHC3Q92529 594 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 LHX5Q9H2C1 402 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 POPDC2Q9HBU9 364 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 APEX2Q9UBZ4 518 aa20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 EIF2B4Q9UI10 523 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1B-202ENST00000489921 LAMA5O15230 3695 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 SH3BP5O60239 455 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 MOCS2O96007 188 aaPredicted RBP20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 PROS1P07225 676 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 CSKP41240 450 aa20.11■□□□□ 0.81
TNFRSF1B-202ENST00000489921 YWHAZP63104 245 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms