RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ENOSF1Q7L5Y1 443 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 DEFB119Q8N690 84 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 C1orf131Q8NDD1 294 aaKnown RBP12.28□□□□□ -0.44
SRSF4-204ENST00000489898 OR2I1PQ8NGU4 316 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 SPACA7Q96KW9 195 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 HSPA12BQ96MM6 686 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 CNTNAP3BQ96NU0 1288 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 CNTNAP3Q9BZ76 1288 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
SRSF4-204ENST00000489898 MTG2Q9H4K7 406 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 THAP9Q9H5L6 903 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 SAMSN1Q9NSI8 373 aaKnown RBP12.28□□□□□ -0.44
SRSF4-204ENST00000489898 BCCIPQ9P287 314 aaKnown RBP eCLIP12.28□□□□□ -0.44
SRSF4-204ENST00000489898 GGA2Q9UJY4 613 aa12.28□□□□□ -0.44
SRSF4-204ENST00000489898 FOXN3O00409 490 aaPredicted RBP12.27□□□□□ -0.45
SRSF4-204ENST00000489898 KRT5P13647 590 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 ENGP17813 658 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 TPMTP51580 245 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 TBX4P57082 545 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 SLC8A3P57103 927 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 ZNF445P59923 1031 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 RPL6Q02878 288 aaKnown RBP12.27□□□□□ -0.45
SRSF4-204ENST00000489898 ZNF33AQ06730 810 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 EXOC3L4Q17RC7 722 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 NUGGCQ68CJ6 796 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 SMYD5Q6GMV2 418 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 CXorf57Q6NSI4 855 aaKnown RBP12.27□□□□□ -0.45
SRSF4-204ENST00000489898 GBP6Q6ZN66 633 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.45
SRSF4-204ENST00000489898 LPCAT2Q7L5N7 544 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 CACUL1Q86Y37 369 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 PASD1Q8IV76 773 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 C12orf50Q8NA57 414 aaPredicted RBP12.27□□□□□ -0.45
SRSF4-204ENST00000489898 DDI1Q8WTU0 396 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 DNASE2BQ8WZ79 361 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 PIGKQ92643 395 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 TTC17Q96AE7 1141 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 FAM131CQ96AQ9 280 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 ALG14Q96F25 216 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 SERPINB11Q96P15 392 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 DNAI2Q9GZS0 605 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 PLCB1Q9NQ66 1216 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 ITM2CQ9NQX7 267 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 ZNF212Q9UDV6 495 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 SERGEFQ9UGK8 458 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 NEU3Q9UQ49 428 aa12.27□□□□□ -0.45
SRSF4-204ENST00000489898 NPC1O15118 1278 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 THAP12O43422 761 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 TBL1XO60907 577 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 TRUB2O95900 331 aaKnown RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 TOP3BO95985 862 aaKnown RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 ERCC5P28715 1186 aaPredicted RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 CTSOP43234 321 aaPredicted RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 HARS2P49590 506 aaKnown RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 KLK7P49862 253 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 SHC2P98077 582 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 CENPCQ03188 943 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 SEMA3BQ13214 749 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 ARHGAP44Q17R89 818 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 DCAF6Q58WW2 860 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 MBLAC2Q68D91 279 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 CHST9Q7L1S5 443 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 SLC26A9Q7LBE3 791 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 CIR1Q86X95 450 aaPredicted RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 AHI1Q8N157 1196 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 HJURPQ8NCD3 748 aaPredicted RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 ZNF397Q8NF99 534 aaPredicted RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 FIBINQ8TAL6 211 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 EPS8L1Q8TE68 723 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 WFIKKN2Q8TEU8 576 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 RNF139Q8WU17 664 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 NT5C3BQ969T7 300 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 VOPP1Q96AW1 172 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 LHX5Q9H2C1 402 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 NDST4Q9H3R1 872 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 POPDC2Q9HBU9 364 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 PRSS16Q9NQE7 514 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 ASNSD1Q9NWL6 643 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 NOCTQ9UK39 431 aaKnown RBP12.26□□□□□ -0.45
SRSF4-204ENST00000489898 DNAJC12Q9UKB3 198 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 OR51B4Q9Y5P0 310 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 MYLKQ15746 1914 aa12.26□□□□□ -0.45
SRSF4-204ENST00000489898 F8VZ95 297 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 AP5Z1O43299 807 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 ZNF217O75362 1048 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 DAB1O75553 588 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 LUC7L3O95232 432 aaKnown RBP12.25□□□□□ -0.45
SRSF4-204ENST00000489898 DLDP09622 509 aaKnown RBP12.25□□□□□ -0.45
SRSF4-204ENST00000489898 CD59P13987 128 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 CD6P30203 668 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 GGCXP38435 758 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 ANP32AP39687 249 aaKnown RBP12.25□□□□□ -0.45
SRSF4-204ENST00000489898 ACADSBP45954 432 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 JAM2P57087 298 aa12.25□□□□□ -0.45
SRSF4-204ENST00000489898 RPS14P62263 151 aaKnown RBP12.25□□□□□ -0.45
SRSF4-204ENST00000489898 FAM193AP78312 1265 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms