RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 POLNQ7Z5Q5 900 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 NT5DC3Q86UY8 548 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 LGI2Q8N0V4 545 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 GJD3Q8N144 294 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 IRF7Q92985 503 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 IGSF8Q969P0 613 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 DDX50Q9BQ39 737 aaKnown RBP16.64■□□□□ 0.25
CLIC4-203ENST00000489758 BRD9Q9H8M2 597 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 ECT2Q9H8V3 914 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 GTSE1Q9NYZ3 720 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 MARK1Q9P0L2 795 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 OR12D3Q9UGF7 316 aa16.64■□□□□ 0.25
CLIC4-203ENST00000489758 KIF26AQ9ULI4 1882 aaPredicted RBP16.63■□□□□ 0.25
CLIC4-203ENST00000489758 IGLV3-10A0A075B6K4 115 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 E9PAM4 449 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 F5H5T6 163 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 HOXC11O43248 304 aaPredicted RBP16.63■□□□□ 0.25
CLIC4-203ENST00000489758 TSPAN3O60637 253 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 NFATC1O95644 943 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 PENKP01210 267 aaPredicted RBP16.63■□□□□ 0.25
CLIC4-203ENST00000489758 KRT7P08729 469 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 SRFP11831 508 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 L1CAMP32004 1257 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 RUNX3Q13761 415 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 DPYSL2Q16555 572 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 FYB2Q5VWT5 728 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 TPGS1Q6ZTW0 290 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 RHOT1Q8IXI2 618 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 SYCE1Q8N0S2 351 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 C17orf53Q8N3J3 647 aaPredicted RBP16.63■□□□□ 0.25
CLIC4-203ENST00000489758 FAM71BQ8TC56 605 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 HSPH1Q92598 858 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 DNASE1L2Q92874 299 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 CHFRQ96EP1 664 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 KCTD15Q96SI1 283 aaPredicted RBP16.63■□□□□ 0.25
CLIC4-203ENST00000489758 DHX35Q9H5Z1 703 aaKnown RBP16.63■□□□□ 0.25
CLIC4-203ENST00000489758 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLIC4-203ENST00000489758 VANGL2Q9ULK5 521 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 DUSP12Q9UNI6 340 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 SORCS3Q9UPU3 1222 aa16.63■□□□□ 0.25
CLIC4-203ENST00000489758 DRGXA6NNA5 263 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 PSTPIP1O43586 416 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 LRIG2O94898 1065 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 FTCDO95954 541 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 ADH1CP00326 375 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 HOXD9P28356 352 aaPredicted RBP16.62■□□□□ 0.25
CLIC4-203ENST00000489758 CTNNA1P35221 906 aaKnown RBP16.62■□□□□ 0.25
CLIC4-203ENST00000489758 MARCKSL1P49006 195 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 RPS24P62847 133 aaKnown RBP16.62■□□□□ 0.25
CLIC4-203ENST00000489758 ITPRIPL2Q3MIP1 535 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 MPPE1Q53F39 396 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 MPP7Q5T2T1 576 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 IER5LQ5T953 404 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 CPA6Q8N4T0 437 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 KRT35Q92764 455 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 C1QTNF1Q9BXJ1 281 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 PPARGC1AQ9UBK2 798 aaKnown RBP16.62■□□□□ 0.25
CLIC4-203ENST00000489758 PCDHA3Q9Y5H8 950 aa16.62■□□□□ 0.25
CLIC4-203ENST00000489758 GOLGA6L9A6NEM1 432 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 SRGAP2O75044 1071 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 ADH5P11766 374 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 CTNNA2P26232 953 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 HOXC13P31276 330 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 GJC1P36383 396 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 PEX26Q7Z412 305 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 CIR1Q86X95 450 aaPredicted RBP16.61■□□□□ 0.25
CLIC4-203ENST00000489758 CFAP52Q8N1V2 620 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 HJURPQ8NCD3 748 aaPredicted RBP16.61■□□□□ 0.25
CLIC4-203ENST00000489758 TRIM58Q8NG06 486 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 TTC8Q8TAM2 541 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 TSC1Q92574 1164 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 BHMTQ93088 406 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 TRIM44Q96DX7 344 aaPredicted RBP16.61■□□□□ 0.25
CLIC4-203ENST00000489758 TMA16Q96EY4 203 aaKnown RBP16.61■□□□□ 0.25
CLIC4-203ENST00000489758 RPRD1AQ96P16 312 aaPredicted RBP16.61■□□□□ 0.25
CLIC4-203ENST00000489758 BBS2Q9BXC9 721 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 PCDH18Q9HCL0 1135 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 KLHL11Q9NVR0 708 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 ZNF212Q9UDV6 495 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 ZKSCAN5Q9Y2L8 839 aa16.61■□□□□ 0.25
CLIC4-203ENST00000489758 COL4A3Q01955 1670 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 C3orf70A6NLC5 250 aaPredicted RBP16.6■□□□□ 0.25
CLIC4-203ENST00000489758 NEDD8-MDP1E9PL57 170 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 CNTN5O94779 1100 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 CYBBP04839 570 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 CD48P09326 243 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 TNNT1P13805 278 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 TYRP14679 529 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 GOT1P17174 413 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 IL4RP24394 825 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 GJA4P35212 333 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 PEX5P50542 639 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 PFKPQ01813 784 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 GAD2Q05329 585 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 DPYSL3Q14195 570 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 ANO4Q32M45 955 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 ALFQ53S48 1182 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 RABGAP1LQ5R372 815 aa16.6■□□□□ 0.25
CLIC4-203ENST00000489758 TTC39BQ5VTQ0 682 aaPredicted RBP16.6■□□□□ 0.25
CLIC4-203ENST00000489758 LRRC31Q6UY01 552 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms