RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 COPAP53621 1224 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 LIMK1P53667 647 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 LMAN2Q12907 356 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 NNTQ13423 1086 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 C2CD6Q53TS8 623 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 TRIM61Q5EBN2 209 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 FSCBQ5H9T9 825 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 MS4A13Q5J8X5 152 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 OLFML1Q6UWY5 402 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 RBM43Q6ZSC3 357 aaKnown RBP14.53□□□□□ -0.08
VTI1A-206ENST00000489142 FAM124AQ86V42 546 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 CIR1Q86X95 450 aaPredicted RBP14.53□□□□□ -0.08
VTI1A-206ENST00000489142 TMPRSS6Q8IU80 811 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 AHI1Q8N157 1196 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.53□□□□□ -0.08
VTI1A-206ENST00000489142 ENOX1Q8TC92 643 aaKnown RBP14.53□□□□□ -0.08
VTI1A-206ENST00000489142 WFIKKN2Q8TEU8 576 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 AZIN2Q96A70 460 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 HSPA12BQ96MM6 686 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 NOX5Q96PH1 765 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 SLC2A13Q96QE2 648 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 TRIM62Q9BVG3 475 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 NAA15Q9BXJ9 866 aaKnown RBP14.53□□□□□ -0.08
VTI1A-206ENST00000489142 LHX5Q9H2C1 402 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 PDCL3Q9H2J4 239 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 FANCLQ9NW38 375 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 DDIT4Q9NX09 232 aa14.53□□□□□ -0.08
VTI1A-206ENST00000489142 NPC1O15118 1278 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 EPHB6O15197 1021 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 TIMM44O43615 452 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 HSF2BPO75031 334 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 NDUFS2O75306 463 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 ZNF217O75362 1048 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 CFIP05156 583 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 CYP11B1P15538 503 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 POLR2EP19388 210 aaKnown RBP14.52□□□□□ -0.09
VTI1A-206ENST00000489142 TFE3P19532 575 aaPredicted RBP14.52□□□□□ -0.09
VTI1A-206ENST00000489142 GGCXP38435 758 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 MAPK8P45983 427 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 RNASE9P60153 205 aaKnown RBP14.52□□□□□ -0.09
VTI1A-206ENST00000489142 ZNF33AQ06730 810 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 NME3Q13232 169 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 CDH18Q13634 790 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 NUMA1Q14980 2115 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 CDKAL1Q5VV42 579 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 SLC36A4Q6YBV0 504 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 BEND5Q7L4P6 421 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 KIAA0907Q7Z7F0 614 aaPredicted RBP14.52□□□□□ -0.09
VTI1A-206ENST00000489142 NOP9Q86U38 636 aaKnown RBP14.52□□□□□ -0.09
VTI1A-206ENST00000489142 SYT12Q8IV01 421 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 RNF34Q969K3 372 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 SIPA1Q96FS4 1042 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 TOE1Q96GM8 510 aaKnown RBP14.52□□□□□ -0.09
VTI1A-206ENST00000489142 LMLNQ96KR4 655 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 DDX50Q9BQ39 737 aaKnown RBP14.52□□□□□ -0.09
VTI1A-206ENST00000489142 ADAM33Q9BZ11 813 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 PILRBQ9UKJ0 227 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 INTS6Q9UL03 887 aaKnown RBP14.52□□□□□ -0.09
VTI1A-206ENST00000489142 PLA2G4CQ9UP65 541 aa14.52□□□□□ -0.09
VTI1A-206ENST00000489142 TYW5A2RUC4 315 aaKnown RBP14.51□□□□□ -0.09
VTI1A-206ENST00000489142 F8VZ95 297 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 GOLGA6L22H0YM25 854 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 DAB1O75553 588 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 LUC7L3O95232 432 aaKnown RBP14.51□□□□□ -0.09
VTI1A-206ENST00000489142 MAOBP27338 520 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 CSKP41240 450 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 CTSOP43234 321 aaPredicted RBP14.51□□□□□ -0.09
VTI1A-206ENST00000489142 TPMTP51580 245 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 CDK17Q00537 523 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 SLC6A3Q01959 620 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 CENPCQ03188 943 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 CT47A1Q5JQC4 288 aaPredicted RBP14.51□□□□□ -0.09
VTI1A-206ENST00000489142 EFHC1Q5JVL4 640 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 MPP7Q5T2T1 576 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 SASS6Q6UVJ0 657 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 FIBINQ8TAL6 211 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 SLC20A1Q8WUM9 679 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 PRCCQ92733 491 aaPredicted RBP14.51□□□□□ -0.09
VTI1A-206ENST00000489142 BTN2A3PQ96KV6 586 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 GPR174Q9BXC1 333 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 GANQ9H2C0 597 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 TMEM245Q9H330 911 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 FAM207AQ9NSI2 230 aaPredicted RBP14.51□□□□□ -0.09
VTI1A-206ENST00000489142 USP36Q9P275 1121 aaKnown RBP14.51□□□□□ -0.09
VTI1A-206ENST00000489142 CEP83Q9Y592 693 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 PCDH15Q96QU1 1955 aa14.51□□□□□ -0.09
VTI1A-206ENST00000489142 CNOT1A5YKK6 2376 aaKnown RBP14.5□□□□□ -0.09
VTI1A-206ENST00000489142 KCNU1A8MYU2 1149 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 F5H5T6 163 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 H0Y626 953 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 CDX4O14627 284 aaPredicted RBP14.5□□□□□ -0.09
VTI1A-206ENST00000489142 TM4SF5O14894 197 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 GFPT2O94808 682 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 MMEP08473 750 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 DLDP09622 509 aaKnown RBP14.5□□□□□ -0.09
VTI1A-206ENST00000489142 ACADMP11310 421 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 CD6P30203 668 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 IRAK1P51617 712 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 BPIFB4P59827 614 aa14.5□□□□□ -0.09
VTI1A-206ENST00000489142 POLR2FP61218 127 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms