RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 CARNMT1Q8N4J0 409 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 CADM4Q8NFZ8 388 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 SPATA20Q8TB22 786 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 PRICKLE1Q96MT3 831 aaPredicted RBP16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 KREMEN1Q96MU8 473 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 NUCKS1Q9H1E3 243 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 ST7Q9NRC1 585 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 TM7SF3Q9NS93 570 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 STOML2Q9UJZ1 356 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 INTS6Q9UL03 887 aaKnown RBP16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 CTNND2Q9UQB3 1225 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 BTBD3Q9Y2F9 522 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 SNX11Q9Y5W9 270 aa16.53■□□□□ 0.24
ERGIC3-217ENST00000488935 PLXNA2O75051 1894 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 ZFYVE26Q68DK2 2539 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 LAMA5O15230 3695 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 TP53BP1Q12888 1972 aaPredicted RBP16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 PPP1R3GB7ZBB8 358 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 NPC1O15118 1278 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 TIMM44O43615 452 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 ACSL4O60488 711 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 CBFA2T3O75081 653 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 IGLV3-19P01714 112 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 POLR2EP19388 210 aaKnown RBP16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 LRRC63Q05C16 580 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 CCDC157Q569K6 752 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 SYPL2Q5VXT5 272 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 MSANTD2Q6P1R3 559 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 KIAA0907Q7Z7F0 614 aaPredicted RBP16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 DHX40Q8IX18 779 aaKnown RBP16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 NELFBQ8WX92 580 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 BIRC7Q96CA5 298 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 CCDC34Q96HJ3 373 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 LMLNQ96KR4 655 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 FCRL2Q96LA5 508 aaPredicted RBP16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 SERGEFQ9UGK8 458 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 PCOLCE2Q9UKZ9 415 aa16.52■□□□□ 0.24
ERGIC3-217ENST00000488935 DOCK9Q9BZ29 2069 aa16.52■□□□□ 0.23
ERGIC3-217ENST00000488935 CELSR3Q9NYQ7 3312 aa16.52■□□□□ 0.23
ERGIC3-217ENST00000488935 FAM208BQ5VWN6 2430 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 FAM170AA1A519 330 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 GADD45BO75293 160 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 SEMA4FO95754 770 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 IGLV3-27P01718 113 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 PAEPP09466 180 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 DLDP09622 509 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 ATXN1LP0C7T5 689 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 MATKP42679 507 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 ZNF132P52740 706 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 PITX1P78337 314 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 APBA1Q02410 837 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 SCAPQ12770 1279 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 SLC14A1Q13336 389 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 TTI2Q6NXR4 508 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 GJB7Q6PEY0 223 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 C19orf48Q6RUI8 117 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 MFN1Q8IWA4 741 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 AHI1Q8N157 1196 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 EHBP1Q8NDI1 1231 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 DQX1Q8TE96 717 aaKnown RBP16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 GANCQ8TET4 914 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 WFIKKN2Q8TEU8 576 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 FAM149B1Q96BN6 582 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 MYO19Q96H55 970 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 TM9SF3Q9HD45 589 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 TJP2Q9UDY2 1190 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 CYTH4Q9UIA0 394 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 KIAA1257Q9ULG3 409 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 PKD1L2Q7Z442 2459 aa16.51■□□□□ 0.23
ERGIC3-217ENST00000488935 TTC34A8MYJ7 566 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 PSMA7O14818 248 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 SIN3BO75182 1162 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 DNTTP04053 509 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 KRT5P13647 590 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 CSKP41240 450 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 SLC11A2P49281 568 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 RING1Q06587 406 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 KCNH2Q12809 1159 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 TAF5Q15542 800 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 ZNF423Q2M1K9 1284 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 TAC4Q86UU9 113 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 CIR1Q86X95 450 aaPredicted RBP16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 RHBDD1Q8TEB9 315 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 DHTKD1Q96HY7 919 aaPredicted RBP16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 BTBD1Q9H0C5 482 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 ANKRD6Q9Y2G4 727 aa16.5■□□□□ 0.23
ERGIC3-217ENST00000488935 FREM2Q5SZK8 3169 aa16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 SYNJ2BP-COX16A0A087WUM0 186 aa16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 H0Y626 953 aa16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 MID1O15344 667 aa16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 TRIM16O95361 564 aa16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 RDXP35241 583 aaKnown RBP16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 DCAF6Q58WW2 860 aa16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 ZC3H12AQ5D1E8 599 aaKnown RBP16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 RAP1GAP2Q684P5 730 aa16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
ERGIC3-217ENST00000488935 APCDD1Q8J025 514 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms