RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 BTN2A3PQ96KV6 586 aa18.4■□□□□ 0.54
ITGB1-215ENST00000488494 STK33Q9BYT3 514 aa18.4■□□□□ 0.54
ITGB1-215ENST00000488494 RXFP3Q9NSD7 469 aa18.4■□□□□ 0.54
ITGB1-215ENST00000488494 TMEM63CQ9P1W3 806 aa18.4■□□□□ 0.54
ITGB1-215ENST00000488494 CYP8B1Q9UNU6 501 aa18.4■□□□□ 0.54
ITGB1-215ENST00000488494 IGHV1OR15-9A0A0B4J2B8 117 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 LGALS16A8MUM7 142 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 TIMM44O43615 452 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 CDH5P33151 784 aaPredicted RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 PTGER3P43115 390 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 COPB1P53618 953 aaKnown RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 ATXN1P54253 815 aaKnown RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 POLR2FP61218 127 aaKnown RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 RPL6Q02878 288 aaKnown RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 SLC26A9Q7LBE3 791 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 CFAP52Q8N1V2 620 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 CARNMT1Q8N4J0 409 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 AOPEPQ8N6M6 819 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 DDX1Q92499 740 aaKnown RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 LIMA1Q9UHB6 759 aaKnown RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 SIK3Q9Y2K2 1263 aa18.39■□□□□ 0.53
ITGB1-215ENST00000488494 ATXN2Q99700 1313 aaKnown RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 TNRC6BQ9UPQ9 1833 aaKnown RBP18.39■□□□□ 0.53
ITGB1-215ENST00000488494 ZNF217O75362 1048 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 GFPT2O94808 682 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 LSM8O95777 96 aaKnown RBP18.38■□□□□ 0.53
ITGB1-215ENST00000488494 EPHX1P07099 455 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 MMEP08473 750 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 HLA-EP13747 358 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 TACR2P21452 398 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 SLC6A3Q01959 620 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 EIF4EBP2Q13542 120 aaPredicted RBP18.38■□□□□ 0.53
ITGB1-215ENST00000488494 SYCP1Q15431 976 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 PTPRNQ16849 979 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 LYSMD4Q5XG99 296 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 MBLAC2Q68D91 279 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 SLC36A4Q6YBV0 504 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 KIAA0907Q7Z7F0 614 aaPredicted RBP18.38■□□□□ 0.53
ITGB1-215ENST00000488494 ATP6V0D2Q8N8Y2 350 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 ZNF557Q8N988 423 aaPredicted RBP18.38■□□□□ 0.53
ITGB1-215ENST00000488494 SLC20A1Q8WUM9 679 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 PIGKQ92643 395 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 RNF34Q969K3 372 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 RTKNQ9BST9 563 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 EDEM2Q9BV94 578 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 MKRN2Q9H000 416 aaKnown RBP18.38■□□□□ 0.53
ITGB1-215ENST00000488494 PRDM16Q9HAZ2 1276 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 NLRC4Q9NPP4 1024 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 NOCTQ9UK39 431 aaKnown RBP18.38■□□□□ 0.53
ITGB1-215ENST00000488494 THADAQ6YHU6 1953 aa18.38■□□□□ 0.53
ITGB1-215ENST00000488494 CKAP5Q14008 2032 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 F5H5T6 163 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 SLC30A4O14863 429 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 AP5Z1O43299 807 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 LUC7L3O95232 432 aaKnown RBP18.37■□□□□ 0.53
ITGB1-215ENST00000488494 SLC2A3P11169 496 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 ZNF18P17022 549 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 POLR2EP19388 210 aaKnown RBP18.37■□□□□ 0.53
ITGB1-215ENST00000488494 ABCB4P21439 1286 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 CCR1P32246 355 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 JAM2P57087 298 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 LMAN2Q12907 356 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 NME3Q13232 169 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 NCAPHQ15003 741 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 FAM102AQ5T9C2 384 aaPredicted RBP18.37■□□□□ 0.53
ITGB1-215ENST00000488494 OTUD1Q5VV17 481 aaPredicted RBP18.37■□□□□ 0.53
ITGB1-215ENST00000488494 NAA35Q5VZE5 725 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 ZDHHC17Q8IUH5 632 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 CCDC117Q8IWD4 279 aaPredicted RBP18.37■□□□□ 0.53
ITGB1-215ENST00000488494 DEFB119Q8N690 84 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 ZNF366Q8N895 744 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 ZNF397Q8NF99 534 aaPredicted RBP18.37■□□□□ 0.53
ITGB1-215ENST00000488494 LMLNQ96KR4 655 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 PCMTD1Q96MG8 357 aaPredicted RBP18.37■□□□□ 0.53
ITGB1-215ENST00000488494 HSD3B7Q9H2F3 369 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.37■□□□□ 0.53
ITGB1-215ENST00000488494 PLA2G4CQ9UP65 541 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 ABCA7Q8IZY2 2146 aa18.37■□□□□ 0.53
ITGB1-215ENST00000488494 LNP1A1A4G5 178 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 KCNU1A8MYU2 1149 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 PATE3B3GLJ2 98 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 ATP5BP06576 529 aaKnown RBP18.36■□□□□ 0.53
ITGB1-215ENST00000488494 DLDP09622 509 aaKnown RBP18.36■□□□□ 0.53
ITGB1-215ENST00000488494 SOX5P35711 763 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 COPAP53621 1224 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 NOMO3P69849 1222 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 ANO6Q4KMQ2 910 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 C2CD6Q53TS8 623 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 FSCBQ5H9T9 825 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 CAVIN1Q6NZI2 390 aaKnown RBP18.36■□□□□ 0.53
ITGB1-215ENST00000488494 MMS22LQ6ZRQ5 1243 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 ERICH1Q86X53 443 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 CIR1Q86X95 450 aaPredicted RBP18.36■□□□□ 0.53
ITGB1-215ENST00000488494 XYLT1Q86Y38 959 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 MSANTD4Q8NCY6 345 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 FIBINQ8TAL6 211 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 SPAG5Q96R06 1193 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 PRMT1Q99873 361 aaKnown RBP18.36■□□□□ 0.53
ITGB1-215ENST00000488494 TMEM245Q9H330 911 aa18.36■□□□□ 0.53
ITGB1-215ENST00000488494 USP36Q9P275 1121 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms