RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 PRICKLE1Q96MT3 831 aaPredicted RBP13.81□□□□□ -0.2
MECP2-210ENST00000488293 EDEM2Q9BV94 578 aa13.81□□□□□ -0.2
MECP2-210ENST00000488293 NAA15Q9BXJ9 866 aaKnown RBP13.81□□□□□ -0.2
MECP2-210ENST00000488293 MKRN2Q9H000 416 aaKnown RBP13.81□□□□□ -0.2
MECP2-210ENST00000488293 NUCKS1Q9H1E3 243 aaKnown RBP13.81□□□□□ -0.2
MECP2-210ENST00000488293 TMEM245Q9H330 911 aa13.81□□□□□ -0.2
MECP2-210ENST00000488293 ITM2CQ9NQX7 267 aa13.81□□□□□ -0.2
MECP2-210ENST00000488293 STIM2Q9P246 746 aa13.81□□□□□ -0.2
MECP2-210ENST00000488293 USP36Q9P275 1121 aaKnown RBP13.81□□□□□ -0.2
MECP2-210ENST00000488293 TJP2Q9UDY2 1190 aa13.81□□□□□ -0.2
MECP2-210ENST00000488293 SLC12A6Q9UHW9 1150 aa13.81□□□□□ -0.2
MECP2-210ENST00000488293 PILRBQ9UKJ0 227 aa13.81□□□□□ -0.2
MECP2-210ENST00000488293 FHOD1Q9Y613 1164 aa13.81□□□□□ -0.2
MECP2-210ENST00000488293 KCNU1A8MYU2 1149 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 PATE3B3GLJ2 98 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 TPM2P07951 284 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 DLDP09622 509 aaKnown RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 PNMA6AP0CW24 399 aaPredicted RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 C7P10643 843 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 UCHL3P15374 230 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 POLR2EP19388 210 aaKnown RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 ITPKAP23677 461 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 OXTRP30559 389 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 CD70P32970 193 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 CDH5P33151 784 aaPredicted RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 COPAP53621 1224 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 RPS24P62847 133 aaKnown RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 IRX4P78413 519 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 SLC6A3Q01959 620 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 LMAN2Q12907 356 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 MTA1Q13330 715 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 CAMK2GQ13555 558 aaPredicted RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 PTPRNQ16849 979 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 FNDC3BQ53EP0 1204 aaKnown RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 TRIM61Q5EBN2 209 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 PPM1JQ5JR12 505 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 OR6B2Q6IFH4 312 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 SLC23A3Q6PIS1 610 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 SASS6Q6UVJ0 657 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 OLFML1Q6UWY5 402 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 FAM183BPQ6ZVS7 135 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 RABEPKQ7Z6M1 372 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 TMEM35BQ8NCS4 154 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 ZNF397Q8NF99 534 aaPredicted RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 CEP76Q8TAP6 659 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 WFDC5Q8TCV5 224 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 CYB5D2Q8WUJ1 264 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 PRCCQ92733 491 aaPredicted RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 TTC17Q96AE7 1141 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 SIPA1Q96FS4 1042 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 ZNF419Q96HQ0 510 aaPredicted RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 LMLNQ96KR4 655 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 LSM14BQ9BX40 385 aaKnown RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 NUSAP1Q9BXS6 441 aaKnown RBP13.8□□□□□ -0.2
MECP2-210ENST00000488293 STK33Q9BYT3 514 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 PDCL3Q9H2J4 239 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 SYNCQ9H7C4 482 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 FAM204AQ9H8W3 233 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 FBRSQ9HAH7 460 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 PLCB1Q9NQ66 1216 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 TMEM74BQ9NUR3 256 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 ANO10Q9NW15 660 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 TAB2Q9NYJ8 693 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 NCOR2Q9Y618 2525 aa13.8□□□□□ -0.2
MECP2-210ENST00000488293 C4orf47A7E2U8 309 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
MECP2-210ENST00000488293 IGLV3-19P01714 112 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 ERBB2P04626 1255 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 CYP11B1P15538 503 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 TACR2P21452 398 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 CD6P30203 668 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 CCR1P32246 355 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 PITX1P78337 314 aaPredicted RBP13.79□□□□□ -0.2
MECP2-210ENST00000488293 KRT31Q15323 416 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 DUOXA1Q1HG43 343 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 RAP1GAP2Q684P5 730 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 SLC26A9Q7LBE3 791 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 CFAP52Q8N1V2 620 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 CARNMT1Q8N4J0 409 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 DEFB119Q8N690 84 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 OR2T3Q8NH03 318 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 FOXJ1Q92949 421 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 MYEOVQ96EZ4 313 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 VPS16Q9H269 839 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 TMEM9BQ9NQ34 198 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 DDIT4Q9NX09 232 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 WSB2Q9NYS7 404 aaPredicted RBP13.79□□□□□ -0.2
MECP2-210ENST00000488293 RRN3Q9NYV6 651 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 SUN2Q9UH99 717 aa13.79□□□□□ -0.2
MECP2-210ENST00000488293 XPO7Q9UIA9 1087 aaKnown RBP13.79□□□□□ -0.2
MECP2-210ENST00000488293 PCDH15Q96QU1 1955 aa13.78□□□□□ -0.2
MECP2-210ENST00000488293 ASCC3Q8N3C0 2202 aaKnown RBP13.78□□□□□ -0.2
MECP2-210ENST00000488293 CACNA1EQ15878 2313 aa13.78□□□□□ -0.2
MECP2-210ENST00000488293 F5H5T6 163 aa13.78□□□□□ -0.2
MECP2-210ENST00000488293 DAB1O75553 588 aa13.78□□□□□ -0.2
MECP2-210ENST00000488293 GRAP2O75791 330 aa13.78□□□□□ -0.2
MECP2-210ENST00000488293 LSM8O95777 96 aaKnown RBP13.78□□□□□ -0.2
MECP2-210ENST00000488293 MBD3O95983 291 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms