RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 FBXO28Q9NVF7 368 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 RRN3Q9NYV6 651 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 TRPC5Q9UL62 973 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 FZD4Q9ULV1 537 aa3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 C19orf53Q9UNZ5 99 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-219ENST00000488035 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 TARM1B6A8C7 271 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 TISP43B9A030 160 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SMIM22K7EJ46 135 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 CLIC1O00299 241 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 EIF3FO00303 357 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 PRYO14603 147 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 KRT38O76015 456 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 MT-CO3P00414 261 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 EPHB2P29323 1055 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SERPINA4P29622 427 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 CCKARP32238 428 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 ARL4CP56559 192 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 TAS2R50P59544 299 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 WDR5P61964 334 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 CFHR3Q02985 330 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 TFF2Q03403 129 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 RNASELQ05823 741 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 PPFIA1Q13136 1202 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SLC14A1Q13336 389 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 BIRC3Q13489 604 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 RPS6KA2Q15349 733 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SEC23BQ15437 767 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 TMEM119Q4V9L6 283 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 CEP85Q6P2H3 762 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 MTHFD1LQ6UB35 978 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF782Q6ZMW2 699 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SYNE3Q6ZMZ3 975 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SYT13Q7L8C5 426 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF804AQ7Z570 1209 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 TTC30AQ86WT1 665 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 CPOQ8IVL8 374 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 FTSJ3Q8IY81 847 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 FAM71DQ8N9W8 422 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SPPL3Q8TCT6 385 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 AFG1LQ8WV93 481 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 THAP4Q8WY91 577 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 OVCA2Q8WZ82 227 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 DAZAP1Q96EP5 407 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 REXO5Q96IC2 774 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 RITA1Q96K30 269 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 HERC2P3Q9BVR0 1158 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SAYSD1Q9NPB0 183 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 GGA3Q9NZ52 723 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 SEMA5BQ9P283 1151 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 UBE2J1Q9Y385 318 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 LRP12Q9Y561 859 aa3.26□□□□□ -1.89
R3HDM1-219ENST00000488035 MYMKA6NI61 221 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 E7EVH7 732 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 NKX2-8O15522 239 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 IRAK2O43187 625 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 LATS1O95835 1130 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 RXRAP19793 462 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 MMP8P22894 467 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 NDUFS1P28331 727 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 STAT6P42226 847 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 MAPK9P45984 424 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 AGTR2P50052 363 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 POLE2P56282 527 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 HOXA4Q00056 320 aaPredicted RBP3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 KCNB1Q14721 858 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 LARS2Q15031 903 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 PROSER3Q2NL68 480 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 MIDNQ504T8 468 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 DCDC5Q6ZRR9 648 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 RFX8Q6ZV50 586 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 TFAP2DQ7Z6R9 452 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 YTHDF3Q7Z739 585 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 CHSY1Q86X52 802 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 C2CD5Q86YS7 1000 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 SMRP1Q8NCR6 262 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 OR52L2PQ8NGH6 319 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 OR6Y1Q8NGX8 325 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 GLMPQ8WWB7 406 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 PPM1EQ8WY54 764 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 AKAP1Q92667 903 aaKnown RBP eCLIP3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 GOLGA1Q92805 767 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 UBXN10Q96LJ8 280 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 CINPQ9BW66 212 aaPredicted RBP3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 TWSG1Q9GZX9 223 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 RMI1Q9H9A7 625 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 MLXIPLQ9NP71 852 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 G6PC2Q9NQR9 355 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 LIN7CQ9NUP9 197 aaKnown RBP3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 ELOVL5Q9NYP7 299 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 KIF17Q9P2E2 1029 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 ZNF112Q9UJU3 913 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 SLC12A4Q9UP95 1085 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 B3GNT3Q9Y2A9 372 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 PCDHA10Q9Y5I2 948 aa3.25□□□□□ -1.89
R3HDM1-219ENST00000488035 H7C1Q1 480 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 RRHO14718 337 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 JTBO76095 146 aa3.24□□□□□ -1.89
R3HDM1-219ENST00000488035 LARGE1O95461 756 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms