RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 NAF1Q96HR8 494 aaKnown RBP26.86■■□□□ 1.89
HLA-C-208ENST00000487245 SENP8Q96LD8 212 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 WWP1Q9H0M0 922 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 DOCK3Q8IZD9 2030 aa26.86■■□□□ 1.89
HLA-C-208ENST00000487245 CAPN14A8MX76 684 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 CLDN5O00501 218 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 IGHA2P01877 340 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 DEUP1Q05D60 604 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 PAFAH1B3Q15102 231 aaKnown RBP26.85■■□□□ 1.89
HLA-C-208ENST00000487245 MDH1BQ5I0G3 518 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 RINLQ6ZS11 566 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 PDZD4Q76G19 769 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-208ENST00000487245 STKLD1Q8NE28 680 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 SIKE1Q9BRV8 207 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 TAS2R1Q9NYW7 299 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 RAD54BQ9Y620 910 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 M0QYT0 321 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 PPP1R12AO14974 1030 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-208ENST00000487245 ENTPD5O75356 428 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 AKR1A1P14550 325 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 VAV1P15498 845 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 ACAT1P24752 427 aaKnown RBP26.85■■□□□ 1.89
HLA-C-208ENST00000487245 CHI3L2Q15782 390 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 TBCCQ15814 346 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 HSF5Q4G112 596 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-208ENST00000487245 OTUD1Q5VV17 481 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-208ENST00000487245 LRRC8BQ6P9F7 803 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 RFWD3Q6PCD5 774 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 C17orf99Q6UX52 265 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 PAXIP1Q6ZW49 1069 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-208ENST00000487245 NDUFAF2Q8N183 169 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 TEX9Q8N6V9 391 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 KCNV2Q8TDN2 545 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 LRRN4Q8WUT4 740 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 DEPDC1BQ8WUY9 529 aa26.85■■□□□ 1.89
HLA-C-208ENST00000487245 DDX43Q9NXZ2 648 aaKnown RBP26.85■■□□□ 1.89
HLA-C-208ENST00000487245 C9IYK1 514 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 KIF1CO43896 1103 aaKnown RBP26.84■■□□□ 1.89
HLA-C-208ENST00000487245 TKTL1P51854 596 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 GJA9P57773 515 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 NIPAL4Q0D2K0 466 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 CRLF3Q8IUI8 442 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 ARHGAP24Q8N264 748 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 COLGALT1Q8NBJ5 622 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 NDRG1Q92597 394 aaKnown RBP26.84■■□□□ 1.89
HLA-C-208ENST00000487245 NTAN1Q96AB6 310 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 MECRQ9BV79 373 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 NMUR2Q9GZQ4 415 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 PCMTD2Q9NV79 361 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 RRN3Q9NYV6 651 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 CDY2AQ9Y6F7 541 aa26.84■■□□□ 1.89
HLA-C-208ENST00000487245 DUSP11O75319 330 aaKnown RBP26.83■■□□□ 1.89
HLA-C-208ENST00000487245 BEST1O76090 585 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 THP07101 528 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 WASHC5Q12768 1159 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 FAM182AQ5T1J6 154 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 CES4AQ5XG92 561 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 ZFP42Q96MM3 310 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 SYT15Q9BQS2 421 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 MTG1Q9BT17 334 aaPredicted RBP26.83■■□□□ 1.89
HLA-C-208ENST00000487245 SLC13A1Q9BZW2 595 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 CNGB3Q9NQW8 809 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 FAM105AQ9NUU6 356 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 STOML1Q9UBI4 398 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 PTCH2Q9Y6C5 1203 aa26.83■■□□□ 1.89
HLA-C-208ENST00000487245 SDR42E2A6NKP2 422 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 MFSD11O43934 449 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 RAP1GDS1P52306 607 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 HUNKP57058 714 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 MAP3K7CLP57077 242 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 DSTYKQ6XUX3 929 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 DENND5BQ6ZUT9 1274 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 TTC7BQ86TV6 843 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 MCUR1Q96AQ8 359 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 NAT9Q9BTE0 207 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 KRT82Q9NSB4 513 aa26.83■■□□□ 1.88
HLA-C-208ENST00000487245 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.83■■□□□ 1.886e-7■■□□□ 11.9
HLA-C-208ENST00000487245 EEF2KO00418 725 aaKnown RBP26.82■■□□□ 1.88
HLA-C-208ENST00000487245 MAGEC1O60732 1142 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 RPLP2P05387 115 aaKnown RBP26.82■■□□□ 1.88
HLA-C-208ENST00000487245 PTDSS1P48651 473 aaKnown RBP26.82■■□□□ 1.88
HLA-C-208ENST00000487245 NDUFV1P49821 464 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 BLMHQ13867 455 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 DPYSQ14117 519 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 KHDC1Q4VXA5 237 aaKnown RBP26.82■■□□□ 1.88
HLA-C-208ENST00000487245 MROH9Q5TGP6 573 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 SMC1BQ8NDV3 1235 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 LGMNQ99538 433 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 CRTAC1Q9NQ79 661 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 CDH9Q9ULB4 789 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 ST3GAL5Q9UNP4 418 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 GIT1Q9Y2X7 761 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 HBS1LQ9Y450 684 aaKnown RBP26.82■■□□□ 1.88
HLA-C-208ENST00000487245 MFHAS1Q9Y4C4 1052 aa26.82■■□□□ 1.88
HLA-C-208ENST00000487245 CAPN9O14815 690 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 ATP6V1C1P21283 382 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 RPL9P32969 192 aaKnown RBP26.81■■□□□ 1.88
HLA-C-208ENST00000487245 ADRA1BP35368 520 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 GRIA1P42261 906 aa26.81■■□□□ 1.88
HLA-C-208ENST00000487245 HCAR3P49019 387 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms