RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 NAA35Q5VZE5 725 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 EGFLAMQ63HQ2 1017 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 GRAMD4Q6IC98 578 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 TRNP1Q6NT89 227 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 TERB1Q8NA31 727 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 IL17RCQ8NAC3 791 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 SUMF1Q8NBK3 374 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 ANKRD20A12PQ8NF67 263 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 NEK11Q8NG66 645 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 OLIG1Q8TAK6 271 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 CPA5Q8WXQ8 436 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 GOLGA1Q92805 767 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 NKD2Q969F2 451 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 PRICKLE1Q96MT3 831 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 NAP1L5Q96NT1 182 aaPredicted RBP7.45□□□□□ -1.22
UBE4B-209ENST00000487244 SLC2A13Q96QE2 648 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 ACOX2Q99424 681 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 DCLK3Q9C098 648 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 POPDC2Q9HBU9 364 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 CALCOCO1Q9P1Z2 691 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 DEC1Q9P2X7 70 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 PCDHGA2Q9Y5H1 932 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 THADAQ6YHU6 1953 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 NUP205Q92621 2012 aa7.45□□□□□ -1.22
UBE4B-209ENST00000487244 DOCK4Q8N1I0 1966 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SYNJ2BP-COX16A0A087WUM0 186 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 A0A0A0MRY4 1105 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 TBC1D3BA6NDS4 549 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 CAPN9O14815 690 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 IRAK2O43187 625 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SART1O43290 800 aaKnown RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 MAN1A2O60476 641 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 TRUB2O95900 331 aaKnown RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 MOCS2O96007 188 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 WASP42768 502 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 HARS2P49590 506 aaKnown RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 DGKGP49619 791 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 BPIFB4P59827 614 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 RING1Q06587 406 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 GEN1Q17RS7 908 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 DCAF6Q58WW2 860 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 ZC3H12AQ5D1E8 599 aaKnown RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 ADGRF1Q5T601 910 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 E4F1Q66K89 784 aaPredicted RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 OR6B2Q6IFH4 312 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 ZC3H14Q6PJT7 736 aaKnown RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SYT13Q7L8C5 426 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 PHLDB2Q86SQ0 1253 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 DEFB106AQ8N104 65 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 CPXM2Q8N436 756 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 TXNDC5Q8NBS9 432 aaKnown RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 TMEM35BQ8NCS4 154 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SLC30A5Q8TAD4 765 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 WFDC5Q8TCV5 224 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 DDI1Q8WTU0 396 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 ATRIPQ8WXE1 791 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SORCS1Q8WY21 1168 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 EXOC4Q96A65 974 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SLC39A13Q96H72 371 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SPAG5Q96R06 1193 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 PCDHB18PQ96TA0 734 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 NUCKS1Q9H1E3 243 aaKnown RBP7.44□□□□□ -1.22
UBE4B-209ENST00000487244 EPC1Q9H2F5 836 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 PDCL3Q9H2J4 239 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SYNCQ9H7C4 482 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 COX16Q9P0S2 106 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 WDR35Q9P2L0 1181 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 STOML2Q9UJZ1 356 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 FBXO10Q9UK96 956 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 MMP17Q9ULZ9 603 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 SLC8A2Q9UPR5 921 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 TLR6Q9Y2C9 796 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 ZNF510Q9Y2H8 683 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 CEP83Q9Y592 693 aa7.44□□□□□ -1.22
UBE4B-209ENST00000487244 NUMA1Q14980 2115 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 TNRC6BQ9UPQ9 1833 aaKnown RBP7.43□□□□□ -1.22
UBE4B-209ENST00000487244 A0A1B0GTH6 734 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 SMTNL1A8MU46 457 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 WASH3PC4AMC7 463 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 GOLGA8SH3BPF8 625 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 I6L893 689 aaPredicted RBP7.43□□□□□ -1.22
UBE4B-209ENST00000487244 ACSL4O60488 711 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 HSF2BPO75031 334 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 ATG13O75143 517 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 DAB1O75553 588 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 GJB6O95452 261 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 LSM8O95777 96 aaKnown RBP7.43□□□□□ -1.22
UBE4B-209ENST00000487244 LMNAP02545 664 aaKnown RBP7.43□□□□□ -1.22
UBE4B-209ENST00000487244 HOXA6P31267 233 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 CHKAP35790 457 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 FLT3P36888 993 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 STAT1P42224 750 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 TNFRSF4P43489 277 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 GABRB2P47870 512 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 IRAK1P51617 712 aa7.43□□□□□ -1.22
UBE4B-209ENST00000487244 RNASE9P60153 205 aaKnown RBP7.43□□□□□ -1.22
UBE4B-209ENST00000487244 RPS24P62847 133 aaKnown RBP7.43□□□□□ -1.22
UBE4B-209ENST00000487244 MRPS21P82921 87 aaKnown RBP7.43□□□□□ -1.22
UBE4B-209ENST00000487244 RELBQ01201 579 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms