RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 WARSP23381 471 aaKnown RBP8.68□□□□□ -1.02
XRN1-212ENST00000486211 DUSP3P51452 185 aaPredicted RBP8.68□□□□□ -1.02
XRN1-212ENST00000486211 GALCP54803 685 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 SLC12A3P55017 1021 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 TFAMQ00059 246 aaKnown RBP8.68□□□□□ -1.02
XRN1-212ENST00000486211 CLCA4Q14CN2 919 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 TBR1Q16650 682 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 TMEM259Q4ZIN3 620 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 ARSHQ5FYA8 562 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 ADALQ6DHV7 355 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 NCEH1Q6PIU2 408 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 USP53Q70EK8 1073 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 DPH6Q7L8W6 267 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 ANKS1BQ7Z6G8 1248 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 OXR1Q8N573 874 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 ZNF366Q8N895 744 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 SYT2Q8N9I0 419 aaPredicted RBP8.68□□□□□ -1.02
XRN1-212ENST00000486211 ZNF564Q8TBZ8 553 aaPredicted RBP8.68□□□□□ -1.02
XRN1-212ENST00000486211 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 ATXN7L3BQ96GX2 97 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 IKZF4Q9H2S9 585 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 PRSS16Q9NQE7 514 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 GEMIN8Q9NWZ8 242 aaKnown RBP8.68□□□□□ -1.02
XRN1-212ENST00000486211 SERGEFQ9UGK8 458 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 AGO2Q9UKV8 859 aaKnown RBP8.68□□□□□ -1.02
XRN1-212ENST00000486211 ITGA11Q9UKX5 1188 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 U3KQA8 63 aa8.68□□□□□ -1.02
XRN1-212ENST00000486211 LRBAP50851 2863 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 K7ENM7 598 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 CLDN5O00501 218 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 CYP26A1O43174 497 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 GP1BAP07359 652 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 SCP2P22307 547 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 CASRP41180 1078 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 ZNF131P52739 623 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 SLC5A3P53794 718 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 DAB2P98082 770 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 GTF2BQ00403 316 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 DHX9Q08211 1270 aaKnown RBP8.67□□□□□ -1.02
XRN1-212ENST00000486211 CBLBQ13191 982 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 ITPR3Q14573 2671 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 IL17AQ16552 155 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 Q6ZVU0 165 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 PTRH1Q86Y79 214 aaKnown RBP8.67□□□□□ -1.02
XRN1-212ENST00000486211 CSGALNACT2Q8N6G5 542 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 ZSWIM2Q8NEG5 633 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 OR4C6Q8NH72 309 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 KCNK16Q96T55 309 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 FUCA2Q9BTY2 467 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 B3GNT5Q9BYG0 378 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 CIPCQ9C0C6 399 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 ELOVL4Q9GZR5 314 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 FBRSQ9HAH7 460 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 KCND2Q9NZV8 630 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 ENTPD2Q9Y5L3 495 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 CYP46A1Q9Y6A2 500 aa8.67□□□□□ -1.02
XRN1-212ENST00000486211 FAM47DPA6NHR8 397 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 SPINT1O43278 529 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 GJB6O95452 261 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 KLKB1P03952 638 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 DNTTP04053 509 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 CCR5P51681 352 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 RBP5P82980 135 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 E2F5Q15329 346 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 TTC31Q49AM3 519 aaPredicted RBP8.66□□□□□ -1.02
XRN1-212ENST00000486211 HYIQ5T013 277 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 KRT79Q5XKE5 535 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 SLFN12LQ6IEE8 588 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 USP30Q70CQ3 517 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 HS2ST1Q7LGA3 356 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 TMC6Q7Z403 805 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 BRSK2Q8IWQ3 736 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 NSUN7Q8NE18 718 aaKnown RBP8.66□□□□□ -1.02
XRN1-212ENST00000486211 HPS3Q969F9 1004 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 GRAMD1AQ96CP6 724 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 SERAC1Q96JX3 654 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 MRPL45Q9BRJ2 306 aaKnown RBP8.66□□□□□ -1.02
XRN1-212ENST00000486211 REEP2Q9BRK0 252 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 NACA2Q9H009 215 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 PABPC3Q9H361 631 aaKnown RBP8.66□□□□□ -1.02
XRN1-212ENST00000486211 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 CYLDQ9NQC7 956 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 OSER1Q9NX31 292 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 LSM7Q9UK45 103 aaKnown RBP8.66□□□□□ -1.02
XRN1-212ENST00000486211 ODF2LQ9ULJ1 636 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 KIF26BQ2KJY2 2108 aa8.66□□□□□ -1.02
XRN1-212ENST00000486211 MDM4O15151 490 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 TIMM44O43615 452 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 STC2O76061 302 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 TNFSF15O95150 251 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 KRT19P08727 400 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 PLA2G4BP0C869 781 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 PTPN1P18031 435 aaKnown RBP8.65□□□□□ -1.02
XRN1-212ENST00000486211 TGM2P21980 687 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 DGKAP23743 735 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 ELAVL4P26378 380 aaKnown RBP8.65□□□□□ -1.02
XRN1-212ENST00000486211 TGIF1Q15583 401 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 TTC38Q5R3I4 469 aa8.65□□□□□ -1.02
XRN1-212ENST00000486211 ZNF776Q68DI1 518 aaPredicted RBP8.65□□□□□ -1.02
XRN1-212ENST00000486211 PAQR9Q6ZVX9 377 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms