RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 MARK1Q9P0L2 795 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 XPO7Q9UIA9 1087 aaKnown RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 VANGL2Q9ULK5 521 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 USP18Q9UMW8 372 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 AP4E1Q9UPM8 1137 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 MRPS17Q9Y2R5 130 aaKnown RBP11.78□□□□□ -0.52
NUP50-216ENST00000486184 HS3ST4Q9Y661 456 aa11.78□□□□□ -0.52
NUP50-216ENST00000486184 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 TNFRSF10AO00220 468 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 HOXC11O43248 304 aaPredicted RBP11.77□□□□□ -0.53
NUP50-216ENST00000486184 BUB1O43683 1085 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 SRGAP2O75044 1071 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 C7P10643 843 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 SLC6A4P31645 630 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 CTHP32929 405 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 GGCXP38435 758 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 SLC1A1P43005 524 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 SOX9P48436 509 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 HADHBP55084 474 aaKnown RBP11.77□□□□□ -0.53
NUP50-216ENST00000486184 MLLT6P55198 1093 aaPredicted RBP11.77□□□□□ -0.53
NUP50-216ENST00000486184 SCAPQ12770 1279 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 AUHQ13825 339 aaKnown RBP11.77□□□□□ -0.53
NUP50-216ENST00000486184 ERMARDQ5T6L9 678 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 ZNF852Q6ZMS4 543 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 NUDT18Q6ZVK8 323 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 DAAM2Q86T65 1068 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 EFCAB3Q8N7B9 438 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 NAT16Q8N8M0 369 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 ZNF557Q8N988 423 aaPredicted RBP11.77□□□□□ -0.53
NUP50-216ENST00000486184 C1orf74Q96LT6 269 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 ZNF830Q96NB3 372 aaPredicted RBP11.77□□□□□ -0.53
NUP50-216ENST00000486184 EPAS1Q99814 870 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 DHX35Q9H5Z1 703 aaKnown RBP11.77□□□□□ -0.53
NUP50-216ENST00000486184 ZWILCHQ9H900 591 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 TMPRSS4Q9NRS4 437 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 DNAJC17Q9NVM6 304 aaKnown RBP11.77□□□□□ -0.53
NUP50-216ENST00000486184 PLK2Q9NYY3 685 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 STIM2Q9P246 746 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 OR12D3Q9UGF7 316 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 FZD10Q9ULW2 581 aa11.77□□□□□ -0.53
NUP50-216ENST00000486184 NCOR1O75376 2440 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 RCCD1A6NED2 376 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 OTOL1A6NHN0 477 aaPredicted RBP11.76□□□□□ -0.53
NUP50-216ENST00000486184 E9PAM4 449 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 H0Y626 953 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 ZSCAN12O43309 604 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 CREB3O43889 395 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 KRT7P08729 469 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 DGKGP49619 791 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 KDSRQ06136 332 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 CDH18Q13634 790 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 KRT81Q14533 505 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 SMTNL2Q2TAL5 461 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 BOLA3Q53S33 107 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 MPP7Q5T2T1 576 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 GRAMD4Q6IC98 578 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 RWDD4Q6NW29 188 aaKnown RBP11.76□□□□□ -0.53
NUP50-216ENST00000486184 FBXL22Q6P050 247 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 PSTKQ8IV42 348 aaKnown RBP11.76□□□□□ -0.53
NUP50-216ENST00000486184 MFN1Q8IWA4 741 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 SYCE1Q8N0S2 351 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 CFAP52Q8N1V2 620 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 CARNMT1Q8N4J0 409 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 FAM3CQ92520 227 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 HSPH1Q92598 858 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 CD101Q93033 1021 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 TBC1D31Q96DN5 1066 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 PRICKLE1Q96MT3 831 aaPredicted RBP11.76□□□□□ -0.53
NUP50-216ENST00000486184 PRMT1Q99873 361 aaKnown RBP11.76□□□□□ -0.53
NUP50-216ENST00000486184 P2RY13Q9BPV8 354 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 SNRNP25Q9BV90 132 aaKnown RBP11.76□□□□□ -0.53
NUP50-216ENST00000486184 LACRTQ9GZZ8 138 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 OSBPL2Q9H1P3 480 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 LZTFL1Q9NQ48 299 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 DEC1Q9P2X7 70 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 GUCA1BQ9UMX6 200 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 PPP2R2CQ9Y2T4 447 aa11.76□□□□□ -0.53
NUP50-216ENST00000486184 A0A1B0GVM2 712 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 TCAF2A6NFQ2 919 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 EEF2KO00418 725 aaKnown RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 DAPK3O43293 454 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 CACNG3O60359 315 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 BUB1BO60566 1050 aaPredicted RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 LUC7L3O95232 432 aaKnown RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 PENKP01210 267 aaPredicted RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 APODP05090 189 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 TNNT1P13805 278 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 HOXD9P28356 352 aaPredicted RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 ARL4AP40617 200 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 EIF2DP41214 584 aaKnown RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 SGSHP51688 502 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 TPI1P60174 286 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 RPS24P62847 133 aaKnown RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 NRG1Q02297 640 aaPredicted RBP11.75□□□□□ -0.53
NUP50-216ENST00000486184 GRSF1Q12849 480 aaKnown RBP eCLIP11.75□□□□□ -0.53
NUP50-216ENST00000486184 UBXN2BQ14CS0 331 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 PON2Q15165 354 aa11.75□□□□□ -0.53
NUP50-216ENST00000486184 PPP6R3Q5H9R7 873 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms