RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 STIM1Q13586 685 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 FUT11Q495W5 492 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 CCDC157Q569K6 752 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 WDR45BQ5MNZ6 344 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 DMRTA1Q5VZB9 504 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 BSPRYQ5W0U4 402 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 PM20D1Q6GTS8 502 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 TMEM270Q6UE05 265 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 BHLHA9Q7RTU4 235 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 ZNF605Q86T29 641 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 CACUL1Q86Y37 369 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 SIX6OS1Q8N1H7 587 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 PPM1KQ8N3J5 372 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 RHBDD1Q8TEB9 315 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 SORCS1Q8WY21 1168 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 TFAP2BQ92481 460 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 FOXJ1Q92949 421 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 MRGPRX1Q96LB2 322 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 TIGD1Q96MW7 591 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 ZDHHC5Q9C0B5 715 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 CIPCQ9C0C6 399 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 THAP10Q9P2Z0 257 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-215ENST00000485550 HOOK1Q9UJC3 728 aaKnown RBP11.04□□□□□ -0.64
HMGN1-215ENST00000485550 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
HMGN1-215ENST00000485550 MYO18BQ8IUG5 2567 aa11.04□□□□□ -0.64
HMGN1-215ENST00000485550 GFRA2O00451 464 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 BIN1O00499 593 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 ATXN7O15265 892 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 MSI1O43347 362 aaKnown RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 BRD2P25440 801 aaKnown RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 MATKP42679 507 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 HARS2P49590 506 aaKnown RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 STARD3Q14849 445 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 TRIP4Q15650 581 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 PPP1R15BQ5SWA1 713 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 RRAGAQ7L523 313 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 UBR7Q8N806 425 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 BAHD1Q8TBE0 780 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 PLD4Q96BZ4 506 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 DHTKD1Q96HY7 919 aaPredicted RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 PIWIL1Q96J94 861 aaKnown RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 NT5C1BQ96P26 610 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 ZSWIM1Q9BR11 485 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 MKRN2Q9H000 416 aaKnown RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 ELOVL2Q9NXB9 296 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMGN1-215ENST00000485550 BTBD3Q9Y2F9 522 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 SLC27A6Q9Y2P4 619 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 CFAP46Q8IYW2 2715 aa11.03□□□□□ -0.64
HMGN1-215ENST00000485550 PLXNA2O75051 1894 aa11.02□□□□□ -0.64
HMGN1-215ENST00000485550 GOLGA6L7A0A1B0GV03 622 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 PPP1R3GB7ZBB8 358 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 M0QYV0 167 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 SYNCRIPO60506 623 aaKnown RBP11.02□□□□□ -0.65
HMGN1-215ENST00000485550 GADD45BO75293 160 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-215ENST00000485550 DKK1O94907 266 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 CER1O95813 267 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 SETSIPP0DME0 302 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 HLA-EP13747 358 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 BMP6P22004 513 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 TBXAS1P24557 533 aaPredicted RBP11.02□□□□□ -0.65
HMGN1-215ENST00000485550 CD6P30203 668 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 DAOAP59103 153 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 BNC1Q01954 994 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 ARID5AQ03989 594 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 ZNF234Q14588 700 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 HLA-BQ31612 363 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 PKDCCQ504Y2 493 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 MPPE1Q53F39 396 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 DCAF12L1Q5VU92 463 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 TMEM215Q68D42 235 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 PMF1Q6P1K2 205 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 LCLAT1Q6UWP7 414 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 TMPRSS6Q8IU80 811 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 ARHGEF19Q8IW93 802 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 GALNT15Q8N3T1 639 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 CPXM2Q8N436 756 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 CLEC4CQ8WTT0 213 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 UCMAQ8WVF2 138 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 NELFBQ8WX92 580 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 KCTD13Q8WZ19 329 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 TMA16Q96EY4 203 aaKnown RBP11.02□□□□□ -0.65
HMGN1-215ENST00000485550 TOE1Q96GM8 510 aaKnown RBP11.02□□□□□ -0.65
HMGN1-215ENST00000485550 CEP63Q96MT8 703 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 GPR174Q9BXC1 333 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 MIS12Q9H081 205 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 ABCC13Q9NSE7 274 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 OLA1Q9NTK5 396 aaKnown RBP11.02□□□□□ -0.65
HMGN1-215ENST00000485550 KIAA1257Q9ULG3 409 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 CTNND2Q9UQB3 1225 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 RAI2Q9Y5P3 530 aa11.02□□□□□ -0.65
HMGN1-215ENST00000485550 ARID1BQ8NFD5 2236 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-215ENST00000485550 KCNJ18B7U540 433 aa11.01□□□□□ -0.65
HMGN1-215ENST00000485550 TK2O00142 265 aa11.01□□□□□ -0.65
HMGN1-215ENST00000485550 PLK4O00444 970 aa11.01□□□□□ -0.65
HMGN1-215ENST00000485550 BCAT2O15382 392 aaPredicted RBP11.01□□□□□ -0.65
HMGN1-215ENST00000485550 FLRT2O43155 660 aa11.01□□□□□ -0.65
HMGN1-215ENST00000485550 EPHX1P07099 455 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms