RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 FIGNQ5HY92 759 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 TMEM215Q68D42 235 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 CHST9Q7L1S5 443 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 ZNF571Q7Z3V5 609 aaPredicted RBP16.8■□□□□ 0.28
DDR1-246ENST00000485023 TRMT11Q7Z4G4 463 aaKnown RBP16.8■□□□□ 0.28
DDR1-246ENST00000485023 WDR5BQ86VZ2 330 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 CAMKK1Q8N5S9 505 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 RXFP2Q8WXD0 754 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 SELENOOQ9BVL4 669 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 SLC2A11Q9BYW1 496 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 TKTL2Q9H0I9 626 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 SIK2Q9H0K1 926 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 RAB6CQ9H0N0 254 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 ANLNQ9NQW6 1124 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 RRN3Q9NYV6 651 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 BCCIPQ9P287 314 aaKnown RBP eCLIP16.8■□□□□ 0.28
DDR1-246ENST00000485023 GGA2Q9UJY4 613 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 VANGL2Q9ULK5 521 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 SMG5Q9UPR3 1016 aaKnown RBP16.8■□□□□ 0.28
DDR1-246ENST00000485023 INVSQ9Y283 1065 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 STARD13Q9Y3M8 1113 aa16.8■□□□□ 0.28
DDR1-246ENST00000485023 WASH3PC4AMC7 463 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 ATMINO43313 823 aaPredicted RBP16.79■□□□□ 0.28
DDR1-246ENST00000485023 HRO43593 1189 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 LMNAP02545 664 aaKnown RBP16.79■□□□□ 0.28
DDR1-246ENST00000485023 PABPC1P11940 636 aaKnown RBP16.79■□□□□ 0.28
DDR1-246ENST00000485023 SDC4P31431 198 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 CXCR3P49682 368 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 IRAK1P51617 712 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 SIM2Q14190 667 aaPredicted RBP16.79■□□□□ 0.28
DDR1-246ENST00000485023 HSF5Q4G112 596 aaPredicted RBP16.79■□□□□ 0.28
DDR1-246ENST00000485023 SH3PXD2AQ5TCZ1 1133 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 SDE2Q6IQ49 451 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 ACAD10Q6JQN1 1059 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 DNAJC24Q6P3W2 148 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 CEP68Q76N32 757 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 FAM131BQ86XD5 332 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 PGBD3Q8N328 593 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 MDGA1Q8NFP4 955 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 CYB5D2Q8WUJ1 264 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 HMGB4Q8WW32 186 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 NT5C3BQ969T7 300 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 RPRD1AQ96P16 312 aaPredicted RBP16.79■□□□□ 0.28
DDR1-246ENST00000485023 PRMT1Q99873 361 aaKnown RBP16.79■□□□□ 0.28
DDR1-246ENST00000485023 HINFPQ9BQA5 517 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 EDEM3Q9BZQ6 932 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 WDCPQ9H6R7 721 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 POLMQ9NP87 494 aaPredicted RBP16.79■□□□□ 0.28
DDR1-246ENST00000485023 AIPL1Q9NZN9 384 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 HS3ST4Q9Y661 456 aa16.79■□□□□ 0.28
DDR1-246ENST00000485023 A0A1W2PQJ5 194 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 H0Y626 953 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 I6L893 689 aaPredicted RBP16.78■□□□□ 0.28
DDR1-246ENST00000485023 CBFA2T2O43439 604 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 LUC7L3O95232 432 aaKnown RBP16.78■□□□□ 0.28
DDR1-246ENST00000485023 GYPCP04921 128 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 KRT3P12035 628 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 PDGFRAP16234 1089 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 RRM1P23921 792 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 HOXA6P31267 233 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 RDXP35241 583 aaKnown RBP16.78■□□□□ 0.28
DDR1-246ENST00000485023 RFC1P35251 1148 aaPredicted RBP16.78■□□□□ 0.28
DDR1-246ENST00000485023 PRKCIP41743 596 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
DDR1-246ENST00000485023 LMAN2Q12907 356 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 AUHQ13825 339 aaKnown RBP16.78■□□□□ 0.28
DDR1-246ENST00000485023 FUT11Q495W5 492 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 CCDC14Q49A88 953 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 FSCBQ5H9T9 825 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 KIAA1211LQ6NV74 962 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 FBXL22Q6P050 247 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 C14orf80Q86SX3 495 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 CCDC117Q8IWD4 279 aaPredicted RBP16.78■□□□□ 0.28
DDR1-246ENST00000485023 MCOLN2Q8IZK6 566 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 AHI1Q8N157 1196 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 C3orf20Q8ND61 904 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 KCNV2Q8TDN2 545 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 UCMAQ8WVF2 138 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 IGSF8Q969P0 613 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 MCEEQ96PE7 176 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 EPC1Q9H2F5 836 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 ELOVL2Q9NXB9 296 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 STON1Q9Y6Q2 735 aa16.78■□□□□ 0.28
DDR1-246ENST00000485023 C2CD4BA6NLJ0 364 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 DDX3XO00571 662 aaKnown RBP eCLIP16.77■□□□□ 0.28
DDR1-246ENST00000485023 DCLK1O15075 740 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 RPP40O75818 363 aaKnown RBP16.77■□□□□ 0.28
DDR1-246ENST00000485023 ALDH1A2O94788 518 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 F9P00740 461 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 PLEKP08567 350 aaPredicted RBP16.77■□□□□ 0.28
DDR1-246ENST00000485023 GPD1P21695 349 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 CASP14P31944 242 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 IL12RB1P42701 662 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 ZNF234Q14588 700 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 EIF4HQ15056 248 aaKnown RBP16.77■□□□□ 0.28
DDR1-246ENST00000485023 BRMS1LQ5PSV4 323 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 RABGAP1LQ5R372 815 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 MPP7Q5T2T1 576 aa16.77■□□□□ 0.28
DDR1-246ENST00000485023 MBLAC2Q68D91 279 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms