RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ZNF397Q8NF99 534 aaPredicted RBP13.37□□□□□ -0.27
HDAC1-209ENST00000484305 NEK11Q8NG66 645 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 CYB5D2Q8WUJ1 264 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 CPA5Q8WXQ8 436 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 C18orf8Q96DM3 657 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 LMLNQ96KR4 655 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 BTN2A3PQ96KV6 586 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 SPACA7Q96KW9 195 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 MRGPRX1Q96LB2 322 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 PCMTD1Q96MG8 357 aaPredicted RBP13.37□□□□□ -0.27
HDAC1-209ENST00000484305 ERGIC2Q96RQ1 377 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 ADAM33Q9BZ11 813 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
HDAC1-209ENST00000484305 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.37□□□□□ -0.27
HDAC1-209ENST00000484305 NOCTQ9UK39 431 aaKnown RBP13.37□□□□□ -0.27
HDAC1-209ENST00000484305 PCDHGA5Q9Y5G8 931 aa13.37□□□□□ -0.27
HDAC1-209ENST00000484305 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 BCLAF3A2AJT9 711 aaKnown RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 PRR5-ARHGAP8B1AHC4 643 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 ZBTB24O43167 697 aaPredicted RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 MAP3K13O43283 966 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 GDF9O60383 454 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 DAB1O75553 588 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 LSM8O95777 96 aaKnown RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 HLA-EP13747 358 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 CHRNB2P17787 502 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 TFE3P19532 575 aaPredicted RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 PRKCHP24723 683 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 NOS2P35228 1153 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 RNASE9P60153 205 aaKnown RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 NOMO3P69849 1222 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 ARHGAP8P85298 464 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 CREB5Q02930 508 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 ARID5AQ03989 594 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 NME3Q13232 169 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 BYSLQ13895 437 aaKnown RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 STARD3Q14849 445 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 PTPRNQ16849 979 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 FSCBQ5H9T9 825 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 OTUD1Q5VV17 481 aaPredicted RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 MBLAC2Q68D91 279 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 XYLT1Q86Y38 959 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 ZDHHC17Q8IUH5 632 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 TMEFF1Q8IYR6 380 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 AHI1Q8N157 1196 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 CARNMT1Q8N4J0 409 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 ATP6V0D2Q8N8Y2 350 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 FIBINQ8TAL6 211 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 WFIKKN2Q8TEU8 576 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 RNF34Q969K3 372 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 SPAG5Q96R06 1193 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 PRMT1Q99873 361 aaKnown RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 BPIFA3Q9BQP9 254 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 MKRN2Q9H000 416 aaKnown RBP13.36□□□□□ -0.27
HDAC1-209ENST00000484305 CD93Q9NPY3 652 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 DLL3Q9NYJ7 618 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 DAAM1Q9Y4D1 1078 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 DNAH14Q0VDD8 3507 aa13.36□□□□□ -0.27
HDAC1-209ENST00000484305 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.35□□□□□ -0.27
HDAC1-209ENST00000484305 TYW5A2RUC4 315 aaKnown RBP13.35□□□□□ -0.27
HDAC1-209ENST00000484305 M0QYT0 321 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 CAVIN2O95810 425 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 EPHX1P07099 455 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 SLC2A3P11169 496 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 ABCB4P21439 1286 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 CCR1P32246 355 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 STAT1P42224 750 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 PI4KAP42356 2102 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 MATKP42679 507 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 DHPSP49366 369 aaPredicted RBP13.35□□□□□ -0.27
HDAC1-209ENST00000484305 FMO1Q01740 532 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 CDR2Q01850 454 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 LMAN2Q12907 356 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 PUM1Q14671 1186 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDAC1-209ENST00000484305 FAM102AQ5T9C2 384 aaPredicted RBP13.35□□□□□ -0.27
HDAC1-209ENST00000484305 NAA35Q5VZE5 725 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 SERPINA13PQ6UXR4 307 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 MMS22LQ6ZRQ5 1243 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 LPCAT2Q7L5N7 544 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 CHSY1Q86X52 802 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 ZNF366Q8N895 744 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 NPY6RQ99463 290 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 FUCA2Q9BTY2 467 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 TMEM245Q9H330 911 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 RXFP3Q9NSD7 469 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 PIGVQ9NUD9 493 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDAC1-209ENST00000484305 SLC12A6Q9UHW9 1150 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 INTS6Q9UL03 887 aaKnown RBP13.35□□□□□ -0.27
HDAC1-209ENST00000484305 CYP8B1Q9UNU6 501 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 PLA2G4CQ9UP65 541 aa13.35□□□□□ -0.27
HDAC1-209ENST00000484305 IGHV1OR15-9A0A0B4J2B8 117 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 F5H5T6 163 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 GOLGA8SH3BPF8 625 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 TEX33O43247 280 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 SYNCRIPO60506 623 aaKnown RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 ZNF217O75362 1048 aa13.34□□□□□ -0.27
HDAC1-209ENST00000484305 LUC7L3O95232 432 aaKnown RBP13.34□□□□□ -0.27
HDAC1-209ENST00000484305 CYP1A1P04798 512 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms